Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG70_RS00260 | Genome accession | NZ_CP094168 |
| Coordinates | 58366..58941 (+) | Length | 191 a.a. |
| NCBI ID | WP_245062174.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0006 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 53366..63941
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG70_RS00235 (MPG70_00235) | uvrD | 54057..56102 (+) | 2046 | WP_245062171.1 | DNA helicase UvrD | - |
| MPG70_RS00240 (MPG70_00240) | flgA | 56099..56755 (+) | 657 | WP_245062173.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG70_RS00245 (MPG70_00245) | - | 56765..57328 (+) | 564 | WP_212793136.1 | UbiX family flavin prenyltransferase | - |
| MPG70_RS00250 (MPG70_00250) | coaD | 57328..57801 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG70_RS00255 (MPG70_00255) | tmk | 57803..58378 (+) | 576 | WP_231164939.1 | dTMP kinase | - |
| MPG70_RS00260 (MPG70_00260) | comFC | 58366..58941 (+) | 576 | WP_245062174.1 | ComF family protein | Machinery gene |
| MPG70_RS00265 (MPG70_00265) | - | 58973..61009 (+) | 2037 | WP_245062175.1 | N-6 DNA methylase | - |
| MPG70_RS00270 (MPG70_00270) | - | 61006..62175 (+) | 1170 | WP_245062176.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21269.85 Da Isoelectric Point: 8.7493
>NTDB_id=667897 MPG70_RS00260 WP_245062174.1 58366..58941(+) (comFC) [Helicobacter pylori strain Hpfe0006]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNAVSYAGKSLEFRTNNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNAVSYAGKSLEFRTNNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667897 MPG70_RS00260 WP_245062174.1 58366..58941(+) (comFC) [Helicobacter pylori strain Hpfe0006]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCACATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGTGTTTAAGGGCGACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCACATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGTGTTTAAGGGCGACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |