Detailed information NTG0667897

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG569_RS25740
• Genome accession: NZ_CP108872
• Coordinates: 5728027..5729313 (+)
• Length: 428 a.a.
• NCBI ID: WP_266827426.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00827
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5723027..5734313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG569_RS25710 (OG569_25700)	-	5723771..5723965 (+)	195	WP_266462266.1	hypothetical protein	-
OG569_RS25725 (OG569_25715)	tig	5724635..5726023 (+)	1389	WP_405932319.1	trigger factor	-
OG569_RS25730 (OG569_25720)	clpP	5726462..5727067 (+)	606	WP_266464267.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG569_RS25735 (OG569_25725)	clpP	5727186..5727866 (+)	681	WP_371549185.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG569_RS25740 (OG569_25730)	clpX	5728027..5729313 (+)	1287	WP_266827426.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG569_RS25745 (OG569_25735)	-	5729381..5730358 (-)	978	WP_405908562.1	hypothetical protein	-
OG569_RS25750 (OG569_25740)	-	5730495..5733119 (+)	2625	WP_405908563.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46910.75 Da
• Isoelectric Point: 4.7838

>NTDB_id=667897 OG569_RS25740 WP_266827426.1 5728027..5729313(+) (clpX) [Streptomyces sp. NBC_00827]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREIEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFESEALEAIADQAILRKTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=667897 OG569_RS25740 WP_266827426.1 5728027..5729313(+) (clpX) [Streptomyces sp. NBC_00827]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCACCGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATTCTGCTCCTCGGCCCGACGGGTTCCGGCAAGACCCTTCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTCATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGATCGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTCGTCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGAGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCAAGACCGGCGCCCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCACTCGAACGTGAACCCGACACTGATCCCGCGGGACGCGCGGGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.531	94.159	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523