Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG84_RS00275 | Genome accession | NZ_CP094164 |
| Coordinates | 62628..63203 (+) | Length | 191 a.a. |
| NCBI ID | WP_154422358.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0012 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57628..68203
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG84_RS00250 (MPG84_00250) | uvrD | 58319..60364 (+) | 2046 | WP_245059517.1 | DNA helicase UvrD | - |
| MPG84_RS00255 (MPG84_00255) | flgA | 60361..61017 (+) | 657 | WP_245059519.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG84_RS00260 (MPG84_00260) | - | 61027..61590 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG84_RS00265 (MPG84_00265) | coaD | 61590..62063 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG84_RS00270 (MPG84_00270) | tmk | 62065..62640 (+) | 576 | WP_245059521.1 | dTMP kinase | - |
| MPG84_RS00275 (MPG84_00275) | comFC | 62628..63203 (+) | 576 | WP_154422358.1 | ComF family protein | Machinery gene |
| MPG84_RS00280 (MPG84_00280) | - | 63236..65275 (+) | 2040 | WP_245059523.1 | N-6 DNA methylase | - |
| MPG84_RS00285 (MPG84_00285) | - | 65272..66493 (+) | 1222 | Protein_55 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21336.97 Da Isoelectric Point: 9.2796
>NTDB_id=667830 MPG84_RS00275 WP_154422358.1 62628..63203(+) (comFC) [Helicobacter pylori strain Hpfe0012]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667830 MPG84_RS00275 WP_154422358.1 62628..63203(+) (comFC) [Helicobacter pylori strain Hpfe0012]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGTCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAAGGCGACAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATATCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGTCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAAGGCGACAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATATCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |