Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG04_RS00265 | Genome accession | NZ_CP094161 |
| Coordinates | 58396..58971 (+) | Length | 191 a.a. |
| NCBI ID | WP_245044451.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0015 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 53396..63971
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG04_RS00240 (MPG04_00240) | uvrD | 54087..56132 (+) | 2046 | WP_245044445.1 | DNA helicase UvrD | - |
| MPG04_RS00245 (MPG04_00245) | flgA | 56129..56785 (+) | 657 | WP_245044447.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG04_RS00250 (MPG04_00250) | - | 56795..57358 (+) | 564 | WP_180422787.1 | UbiX family flavin prenyltransferase | - |
| MPG04_RS00255 (MPG04_00255) | coaD | 57358..57831 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG04_RS00260 (MPG04_00260) | tmk | 57833..58408 (+) | 576 | WP_245044449.1 | dTMP kinase | - |
| MPG04_RS00265 (MPG04_00265) | comFC | 58396..58971 (+) | 576 | WP_245044451.1 | ComF family protein | Machinery gene |
| MPG04_RS00270 (MPG04_00270) | - | 59004..61043 (+) | 2040 | WP_245044453.1 | N-6 DNA methylase | - |
| MPG04_RS00275 (MPG04_00275) | - | 61040..62279 (+) | 1240 | Protein_53 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21240.79 Da Isoelectric Point: 8.8864
>NTDB_id=667809 MPG04_RS00265 WP_245044451.1 58396..58971(+) (comFC) [Helicobacter pylori strain Hpfe0015]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGSLRASNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGSLRASNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667809 MPG04_RS00265 WP_245044451.1 58396..58971(+) (comFC) [Helicobacter pylori strain Hpfe0015]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCATTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGAGTTTAAGGGCTTCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGTGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCATTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGAGTTTAAGGGCTTCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGTGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |