Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG293_RS15045 Genome accession   NZ_CP108867
Coordinates   3500880..3502001 (+) Length   373 a.a.
NCBI ID   WP_405999297.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00829     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3495880..3507001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG293_RS15030 (OG293_15040) - 3496155..3497003 (+) 849 WP_405999294.1 hypothetical protein -
  OG293_RS15035 (OG293_15045) - 3497146..3498876 (-) 1731 WP_405999295.1 BACON domain-containing protein -
  OG293_RS15040 (OG293_15050) radA/sms 3499381..3500805 (+) 1425 WP_405999296.1 DNA repair protein RadA Machinery gene
  OG293_RS15045 (OG293_15055) disA 3500880..3502001 (+) 1122 WP_405999297.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG293_RS15050 (OG293_15060) - 3502059..3502850 (-) 792 WP_405999298.1 hypothetical protein -
  OG293_RS15055 (OG293_15065) - 3503370..3504278 (+) 909 WP_405999299.1 A/G-specific adenine glycosylase -
  OG293_RS15060 (OG293_15070) - 3504463..3505035 (+) 573 WP_405999300.1 SigE family RNA polymerase sigma factor -
  OG293_RS15065 (OG293_15075) - 3505023..3505697 (+) 675 WP_405999301.1 hypothetical protein -
  OG293_RS15070 (OG293_15080) cseB 3505708..3506412 (+) 705 WP_405999302.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40214.97 Da        Isoelectric Point: 5.0230

>NTDB_id=667791 OG293_RS15045 WP_405999297.1 3500880..3502001(+) (disA) [Streptomyces sp. NBC_00829]
MAANDRSAPGKSGGGSGNEALIRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKTVESMCTGGFVLDVEFAATRLRE
LCKLDGALILDKDIGKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVVSVSQSMRLIALYVNGERRVLEESAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAG
VEPERELVVRDYVPEPTPKRSRTVDEALSELNDLTHSELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGAI
IERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=667791 OG293_RS15045 WP_405999297.1 3500880..3502001(+) (disA) [Streptomyces sp. NBC_00829]
GTGGCAGCCAACGACCGGTCAGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCACTGATCCGCGCCGCCCTGAG
CGCGGTCGCTCCCGGCACCGCGCTGCGCGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGCGGCCTCATCGTCCTCG
GCCTGGACAAGACGGTCGAATCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAATTCGCCGCGACCCGGCTCCGCGAG
CTGTGCAAGCTGGACGGCGCGCTCATCCTCGACAAGGACATCGGCAAGATCCACCGGGCCGGTGTGCAGCTGGTCCCGGA
CGCGTCCATCCCGACCGAGGAGACCGGTACCCGCCACCGCACGGCGGACCGGGTCTCGCGTCAGTGCGGCTTCCCCGTCG
TCTCCGTGTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCCGCGATC
CTCTCCCGCGCGAACCAGGCGCTCGCGACCCTTGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTCCGC
GCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCACGGCCGTGGCGCAGCGCCTGGAGATGGTGCGCCGGATCGCCA
CGGAGATCGCCGAGTACGTCGTGGAGTTGGGCACCGACGGCCGCCTTCTCTCCCTCCAGCTCGACGAGCTGATCGCGGGC
GTGGAGCCGGAGCGCGAGCTGGTCGTACGGGACTATGTGCCGGAGCCGACCCCCAAGCGGTCCCGGACGGTGGACGAGGC
GCTCTCCGAGCTGAACGACCTCACCCACTCCGAGCTTCTCGAACTGCCCATAGTGGCAAGGGCGTTGGGATACAGCGGCT
CTCCCGAGACGCTTGACTCCGCGGTCTCGCCGCGGGGCTACCGCCTGCTGGCGAAGGTGCCCAGGCTGCCGGGCGCGATC
ATCGAGCGGCTGGTCGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGATCTGCAGACGGTCGACGG
TGTGGGCGAGGCACGGGCGCGGAGTGTGCGCGAGGGTCTGTCGAGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACGTCT
AG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.783

0.442


Multiple sequence alignment