Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG77_RS00260 | Genome accession | NZ_CP094159 |
| Coordinates | 60597..61172 (+) | Length | 191 a.a. |
| NCBI ID | WP_245109593.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0020 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55597..66172
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG77_RS00235 (MPG77_00235) | uvrD | 56288..58333 (+) | 2046 | WP_245109586.1 | DNA helicase UvrD | - |
| MPG77_RS00240 (MPG77_00240) | flgA | 58330..58986 (+) | 657 | WP_245109588.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG77_RS00245 (MPG77_00245) | - | 58996..59559 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG77_RS00250 (MPG77_00250) | coaD | 59559..60032 (+) | 474 | WP_245109589.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG77_RS00255 (MPG77_00255) | tmk | 60034..60609 (+) | 576 | WP_245109591.1 | dTMP kinase | - |
| MPG77_RS00260 (MPG77_00260) | comFC | 60597..61172 (+) | 576 | WP_245109593.1 | ComF family protein | Machinery gene |
| MPG77_RS00265 (MPG77_00265) | - | 61205..63244 (+) | 2040 | WP_245109595.1 | N-6 DNA methylase | - |
| MPG77_RS00270 (MPG77_00270) | - | 63289..63861 (+) | 573 | Protein_52 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21324.87 Da Isoelectric Point: 9.0940
>NTDB_id=667767 MPG77_RS00260 WP_245109593.1 60597..61172(+) (comFC) [Helicobacter pylori strain Hpfe0020]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667767 MPG77_RS00260 WP_245109593.1 60597..61172(+) (comFC) [Helicobacter pylori strain Hpfe0020]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAGGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCTTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCGCACTTTGCGATCGCGCTTTG
TAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAGGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCTTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCGCACTTTGCGATCGCGCTTTG
TAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |