Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG52_RS00280 | Genome accession | NZ_CP094157 |
| Coordinates | 64488..65063 (+) | Length | 191 a.a. |
| NCBI ID | WP_245076720.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0021 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59488..70063
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG52_RS00255 (MPG52_00255) | uvrD | 60179..62224 (+) | 2046 | WP_245077244.1 | DNA helicase UvrD | - |
| MPG52_RS00260 (MPG52_00260) | flgA | 62221..62877 (+) | 657 | WP_180451308.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG52_RS00265 (MPG52_00265) | - | 62887..63450 (+) | 564 | WP_000780113.1 | UbiX family flavin prenyltransferase | - |
| MPG52_RS00270 (MPG52_00270) | coaD | 63450..63923 (+) | 474 | WP_001169242.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG52_RS00275 (MPG52_00275) | tmk | 63925..64500 (+) | 576 | WP_245076718.1 | dTMP kinase | - |
| MPG52_RS00280 (MPG52_00280) | comFC | 64488..65063 (+) | 576 | WP_245076720.1 | ComF family protein | Machinery gene |
| MPG52_RS00285 (MPG52_00285) | - | 65096..67134 (+) | 2039 | Protein_55 | N-6 DNA methylase | - |
| MPG52_RS00290 (MPG52_00290) | - | 67131..68366 (+) | 1236 | WP_245076722.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21304.93 Da Isoelectric Point: 9.0940
>NTDB_id=667748 MPG52_RS00280 WP_245076720.1 64488..65063(+) (comFC) [Helicobacter pylori strain Hpfe0021]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNIPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGTLRAANAVSYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNIPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGTLRAANAVSYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667748 MPG52_RS00280 WP_245076720.1 64488..65063(+) (comFC) [Helicobacter pylori strain Hpfe0021]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTAAACGATCTGCCTTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTAAGGATTTTACAAGAAAAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGACTTTAAGGGCGGCTAACGCTGTTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGCTAACAACCCACGGGATTTCACTTTCAAAGGCGATAAAAATTTAGATTATTTCTTACTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTAAACGATCTGCCTTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTAAGGATTTTACAAGAAAAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGACTTTAAGGGCGGCTAACGCTGTTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGCTAACAACCCACGGGATTTCACTTTCAAAGGCGATAAAAATTTAGATTATTTCTTACTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.938 |
100 |
0.361 |