Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG67_RS00275 | Genome accession | NZ_CP094156 |
| Coordinates | 62804..63379 (+) | Length | 191 a.a. |
| NCBI ID | WP_245050748.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe005 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57804..68379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG67_RS00250 (MPG67_00250) | uvrD | 58495..60540 (+) | 2046 | WP_245072893.1 | DNA helicase UvrD | - |
| MPG67_RS00255 (MPG67_00255) | flgA | 60537..61193 (+) | 657 | WP_245072894.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG67_RS00260 (MPG67_00260) | - | 61203..61766 (+) | 564 | WP_000780123.1 | UbiX family flavin prenyltransferase | - |
| MPG67_RS00265 (MPG67_00265) | coaD | 61766..62239 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG67_RS00270 (MPG67_00270) | tmk | 62241..62816 (+) | 576 | WP_245050746.1 | dTMP kinase | - |
| MPG67_RS00275 (MPG67_00275) | comFC | 62804..63379 (+) | 576 | WP_245050748.1 | ComF family protein | Machinery gene |
| MPG67_RS00280 (MPG67_00280) | - | 63412..65451 (+) | 2040 | WP_245072895.1 | N-6 DNA methylase | - |
| MPG67_RS00285 (MPG67_00285) | - | 65448..66122 (+) | 675 | WP_245072896.1 | restriction endonuclease subunit S | - |
| MPG67_RS00290 (MPG67_00290) | - | 66149..66706 (+) | 558 | WP_245072897.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21338.90 Da Isoelectric Point: 8.8864
>NTDB_id=667725 MPG67_RS00275 WP_245050748.1 62804..63379(+) (comFC) [Helicobacter pylori strain Hpfe005]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRVNNPRDFTFKGDEALDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRVNNPRDFTFKGDEALDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667725 MPG67_RS00275 WP_245050748.1 62804..63379(+) (comFC) [Helicobacter pylori strain Hpfe005]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAGAGCAAATACG
CGCTGATTGGATCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGTCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAGCTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAATATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAGAGCAAATACG
CGCTGATTGGATCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGTCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAGCTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAATATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |