Detailed information NTG0667701

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG705_RS10955
• Genome accession: NZ_CP108857
• Coordinates: 2500329..2501621 (-)
• Length: 430 a.a.
• NCBI ID: WP_078077342.1
• Uniprot ID: A0A1U9QXP1
• Organism: Streptomyces sp. NBC_00838
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2495329..2506621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG705_RS10945 (OG705_10970)	-	2496526..2499147 (-)	2622	WP_405819975.1	valine--tRNA ligase	-
OG705_RS10950 (OG705_10975)	-	2499285..2500253 (+)	969	WP_405819977.1	hypothetical protein	-
OG705_RS10955 (OG705_10980)	clpX	2500329..2501621 (-)	1293	WP_078077342.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG705_RS10960 (OG705_10985)	clpP	2501776..2502459 (-)	684	WP_277993009.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG705_RS10965 (OG705_10990)	clpP	2502513..2503118 (-)	606	WP_031231653.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG705_RS10970 (OG705_10995)	tig	2503412..2504839 (-)	1428	WP_242570261.1	trigger factor	-
OG705_RS10985 (OG705_11010)	-	2505418..2505612 (-)	195	WP_147875291.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47023.93 Da
• Isoelectric Point: 4.8824

>NTDB_id=667701 OG705_RS10955 WP_078077342.1 2500329..2501621(-) (clpX) [Streptomyces sp. NBC_00838]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQAP
AKKALSVAVYNHYKRVQAGENGGAGSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEESDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDLPALEAIADQAILRGTGARGLRAILEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=667701 OG705_RS10955 WP_078077342.1 2500329..2501621(-) (clpX) [Streptomyces sp. NBC_00838]
GTGGCACGCATCGGTGATGGCGGCGACTTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGTCCCGGGGTCTACATCTGCGACGAGTGCATCGACCTCTGCAATGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCTCGGGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGGCAGGCGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTGTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGCCGGAAGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACACTCCTCGCCCAGA
CGCTGGCCCGGATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGTCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCACGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGAGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCGGTCCTGACCTCGGTGCACAACCTGGACCGT
GAGGCGCTCCTCAAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGTCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCTCCCGGCGCTCGAAGCCATCGCCGACCAGGCGATCCTGCGCGGCACGGGAGCGCGCGGTCTGC
GCGCGATCCTCGAAGAGGTCCTGCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGTGTGGTCATCACG
GCGGACGTCGTGCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTGAAGAACGACGGCCGCCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A1U9QXP1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.268	93.721	0.602
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512