Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG81_RS00270 | Genome accession | NZ_CP094151 |
| Coordinates | 60509..61084 (+) | Length | 191 a.a. |
| NCBI ID | WP_245087147.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe019 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55509..66084
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG81_RS00245 (MPG81_00245) | uvrD | 56198..58243 (+) | 2046 | WP_245087134.1 | DNA helicase UvrD | - |
| MPG81_RS00250 (MPG81_00250) | flgA | 58240..58896 (+) | 657 | WP_245087138.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG81_RS00255 (MPG81_00255) | - | 58906..59469 (+) | 564 | WP_165551712.1 | UbiX family flavin prenyltransferase | - |
| MPG81_RS00260 (MPG81_00260) | coaD | 59469..59942 (+) | 474 | WP_245087141.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG81_RS00265 (MPG81_00265) | tmk | 59946..60521 (+) | 576 | WP_245087144.1 | dTMP kinase | - |
| MPG81_RS00270 (MPG81_00270) | comFC | 60509..61084 (+) | 576 | WP_245087147.1 | ComF family protein | Machinery gene |
| MPG81_RS00275 (MPG81_00275) | - | 61117..63156 (+) | 2040 | WP_245087150.1 | N-6 DNA methylase | - |
| MPG81_RS00280 (MPG81_00280) | - | 63153..64424 (+) | 1272 | WP_245087153.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21353.91 Da Isoelectric Point: 8.6728
>NTDB_id=667678 MPG81_RS00270 WP_245087147.1 60509..61084(+) (comFC) [Helicobacter pylori strain Hpfe019]
MRCLTCLKLSFKPLCSNCLNDLPLSLKIRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKIRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667678 MPG81_RS00270 WP_245087147.1 60509..61084(+) (comFC) [Helicobacter pylori strain Hpfe019]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCCTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AATAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGACTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCCTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AATAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGACTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.938 |
100 |
0.361 |