Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG09_RS00275 | Genome accession | NZ_CP094150 |
| Coordinates | 63288..63863 (+) | Length | 191 a.a. |
| NCBI ID | WP_245027172.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe022 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58288..68863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG09_RS00250 (MPG09_00250) | uvrD | 58979..61024 (+) | 2046 | WP_245027166.1 | DNA helicase UvrD | - |
| MPG09_RS00255 (MPG09_00255) | flgA | 61021..61677 (+) | 657 | WP_245027168.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG09_RS00260 (MPG09_00260) | - | 61687..62250 (+) | 564 | WP_050853983.1 | UbiX family flavin prenyltransferase | - |
| MPG09_RS00265 (MPG09_00265) | coaD | 62250..62723 (+) | 474 | WP_154508494.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG09_RS00270 (MPG09_00270) | tmk | 62725..63300 (+) | 576 | WP_245027170.1 | dTMP kinase | - |
| MPG09_RS00275 (MPG09_00275) | comFC | 63288..63863 (+) | 576 | WP_245027172.1 | ComF family protein | Machinery gene |
| MPG09_RS00280 (MPG09_00280) | - | 63885..65345 (-) | 1461 | WP_154448003.1 | hypothetical protein | - |
| MPG09_RS00285 (MPG09_00285) | - | 65408..66547 (-) | 1140 | WP_001049134.1 | DNA methyltransferase | - |
| MPG09_RS00290 (MPG09_00290) | - | 66551..67558 (-) | 1008 | WP_245027174.1 | DNA adenine methylase | - |
| MPG09_RS00295 (MPG09_00295) | - | 67555..67794 (-) | 240 | WP_000777864.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21394.07 Da Isoelectric Point: 9.4390
>NTDB_id=667654 MPG09_RS00275 WP_245027172.1 63288..63863(+) (comFC) [Helicobacter pylori strain Hpfe022]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667654 MPG09_RS00275 WP_245027172.1 63288..63863(+) (comFC) [Helicobacter pylori strain Hpfe022]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCAAAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAGATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCAAAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAGATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |