Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPF84_RS00295 | Genome accession | NZ_CP094149 |
| Coordinates | 63893..64468 (+) | Length | 191 a.a. |
| NCBI ID | WP_245085798.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe023 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58893..69468
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPF84_RS00270 (MPF84_00270) | uvrD | 59584..61629 (+) | 2046 | WP_245085795.1 | DNA helicase UvrD | - |
| MPF84_RS00275 (MPF84_00275) | flgA | 61626..62282 (+) | 657 | WP_245085796.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPF84_RS00280 (MPF84_00280) | - | 62292..62855 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPF84_RS00285 (MPF84_00285) | coaD | 62855..63328 (+) | 474 | WP_075645530.1 | pantetheine-phosphate adenylyltransferase | - |
| MPF84_RS00290 (MPF84_00290) | tmk | 63330..63905 (+) | 576 | WP_245085797.1 | dTMP kinase | - |
| MPF84_RS00295 (MPF84_00295) | comFC | 63893..64468 (+) | 576 | WP_245085798.1 | ComF family protein | Machinery gene |
| MPF84_RS00300 (MPF84_00300) | - | 64501..66540 (+) | 2040 | WP_245085799.1 | N-6 DNA methylase | - |
| MPF84_RS00305 (MPF84_00305) | - | 66537..67785 (+) | 1249 | Protein_58 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21319.89 Da Isoelectric Point: 8.8736
>NTDB_id=667630 MPF84_RS00295 WP_245085798.1 63893..64468(+) (comFC) [Helicobacter pylori strain Hpfe023]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAYFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAYFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667630 MPF84_RS00295 WP_245085798.1 63893..64468(+) (comFC) [Helicobacter pylori strain Hpfe023]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCATTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGTGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATCTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCAAGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGTACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCATTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGTGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATCTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCAAGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGTACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.938 |
100 |
0.361 |