Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG61_RS00265 | Genome accession | NZ_CP094148 |
| Coordinates | 59498..60073 (+) | Length | 191 a.a. |
| NCBI ID | WP_154411189.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe024 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 54498..65073
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG61_RS00240 (MPG61_00240) | uvrD | 55189..57234 (+) | 2046 | WP_245020464.1 | DNA helicase UvrD | - |
| MPG61_RS00245 (MPG61_00245) | flgA | 57231..57887 (+) | 657 | WP_245020465.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG61_RS00250 (MPG61_00250) | - | 57897..58460 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG61_RS00255 (MPG61_00255) | coaD | 58460..58933 (+) | 474 | WP_245020466.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG61_RS00260 (MPG61_00260) | tmk | 58935..59510 (+) | 576 | WP_245020467.1 | dTMP kinase | - |
| MPG61_RS00265 (MPG61_00265) | comFC | 59498..60073 (+) | 576 | WP_154411189.1 | ComF family protein | Machinery gene |
| MPG61_RS00270 (MPG61_00270) | - | 60106..62145 (+) | 2040 | WP_245020468.1 | N-6 DNA methylase | - |
| MPG61_RS07715 | - | 62213..62803 (+) | 591 | WP_342370021.1 | restriction endonuclease subunit S | - |
| MPG61_RS07720 | - | 62830..63360 (+) | 531 | WP_342369939.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21325.90 Da Isoelectric Point: 9.0901
>NTDB_id=667608 MPG61_RS00265 WP_154411189.1 59498..60073(+) (comFC) [Helicobacter pylori strain Hpfe024]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667608 MPG61_RS00265 WP_154411189.1 59498..60073(+) (comFC) [Helicobacter pylori strain Hpfe024]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTTATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTTATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |