Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG51_RS00280 | Genome accession | NZ_CP094145 |
| Coordinates | 61714..62289 (+) | Length | 191 a.a. |
| NCBI ID | WP_245034246.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe028 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 56714..67289
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG51_RS00255 (MPG51_00255) | uvrD | 57405..59450 (+) | 2046 | WP_245034238.1 | DNA helicase UvrD | - |
| MPG51_RS00260 (MPG51_00260) | flgA | 59447..60103 (+) | 657 | WP_245034240.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG51_RS00265 (MPG51_00265) | - | 60113..60676 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG51_RS00270 (MPG51_00270) | coaD | 60676..61149 (+) | 474 | WP_245034242.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG51_RS00275 (MPG51_00275) | tmk | 61151..61726 (+) | 576 | WP_245034244.1 | dTMP kinase | - |
| MPG51_RS00280 (MPG51_00280) | comFC | 61714..62289 (+) | 576 | WP_245034246.1 | ComF family protein | Machinery gene |
| MPG51_RS00285 (MPG51_00285) | - | 62322..64361 (+) | 2040 | WP_245034248.1 | N-6 DNA methylase | - |
| MPG51_RS00290 (MPG51_00290) | - | 64358..65590 (+) | 1233 | WP_245034250.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21508.08 Da Isoelectric Point: 8.8863
>NTDB_id=667567 MPG51_RS00280 WP_245034246.1 61714..62289(+) (comFC) [Helicobacter pylori strain Hpfe028]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKD
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRDFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKVHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKD
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRDFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667567 MPG51_RS00280 WP_245034246.1 61714..62289(+) (comFC) [Helicobacter pylori strain Hpfe028]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCACTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGAC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAGATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGTGCATTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCACTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGAC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAGATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGTGCATTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
37.949 |
100 |
0.387 |