Detailed information NTG0667550

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG75_RS00740
• Genome accession: NZ_CP094144
• Coordinates: 152606..153568 (+)
• Length: 320 a.a.
• NCBI ID: WP_245039419.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe029
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 147606..158568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG75_RS00710 (MPG75_00710)	panD	149015..149365 (+)	351	WP_231207590.1	aspartate 1-decarboxylase	-
MPG75_RS00715 (MPG75_00715)	-	149376..149669 (+)	294	WP_245039417.1	YbaB/EbfC family nucleoid-associated protein	-
MPG75_RS00720 (MPG75_00720)	-	149669..150664 (+)	996	WP_245040062.1	PDZ domain-containing protein	-
MPG75_RS00725 (MPG75_00725)	comB6	150670..151725 (+)	1056	WP_245040063.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG75_RS00730 (MPG75_00730)	comB7	151741..151866 (+)	126	WP_120902658.1	comB7 lipoprotein	Machinery gene
MPG75_RS00735 (MPG75_00735)	comB8	151863..152606 (+)	744	WP_245039418.1	virB8 family protein	Machinery gene
MPG75_RS00740 (MPG75_00740)	comB9	152606..153568 (+)	963	WP_245039419.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG75_RS00745 (MPG75_00745)	comB10	153561..154697 (+)	1137	WP_245039421.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG75_RS00750 (MPG75_00750)	-	154767..156179 (+)	1413	WP_245039423.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG75_RS00755 (MPG75_00755)	gmd	156193..157338 (+)	1146	WP_031214491.1	GDP-mannose 4,6-dehydratase	-
MPG75_RS00760 (MPG75_00760)	-	157331..158263 (+)	933	WP_231217177.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 36895.54 Da
• Isoelectric Point: 9.4642

>NTDB_id=667550 MPG75_RS00740 WP_245039419.1 152606..153568(+) (comB9) [Helicobacter pylori strain Hpfe029]
MRKVLCTLVGFLLVSSALKADDFLEEANETTPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDKN
YYYNAFMKPQKKENTFEKALTNNKPLKEEKEETKEEETITIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKSK
LSLMPEEIFNDKQFTYFKFDKKLALSKFPVVYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFIKKGKDE

Nucleotide

• Length: 963 bp

>NTDB_id=667550 MPG75_RS00740 WP_245039419.1 152606..153568(+) (comB9) [Helicobacter pylori strain Hpfe029]
ATGCGTAAGGTTTTATGCACTCTTGTGGGCTTTTTGTTGGTTTCTAGCGCTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAACCCCGGCGAATTTAAACCACCCCATGCAAGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGTTTTGATGCGAAAATTTTAGAAAG
TAACGATCGCATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTACAACGCTTTTATGAAGCCACAAAAAAAAGAAAATACCTTTGAAAAGGCCCTCACAAACAACAAACCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAGAAGAGACTATAACCATTGGCGATAACACTAATGCAATGAAAATCGTTAAAAAAG
ACATTCAAAAAGGCTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCCAAA
CTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCTCTCTAA
ATTCCCGGTGGTTTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTGGGCGATTACATTATCGCTG
AAGATGTTTCGGCTAAATGGACTTTAAGATTAGGTAAGGACTATTTGTGTATCCGTTTTATCAAAAAGGGTAAAGATGAA
TAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	90.184	100	0.919