Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OH821_RS19575 Genome accession   NZ_CP108850
Coordinates   4158908..4160032 (+) Length   374 a.a.
NCBI ID   WP_327245732.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00842     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4153908..4165032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH821_RS19560 (OH821_19520) - 4154520..4155401 (+) 882 WP_406420501.1 hypothetical protein -
  OH821_RS19565 (OH821_19525) - 4155426..4157219 (-) 1794 WP_406420502.1 BACON domain-containing protein -
  OH821_RS19570 (OH821_19530) radA/sms 4157415..4158827 (+) 1413 WP_406420503.1 DNA repair protein RadA Machinery gene
  OH821_RS19575 (OH821_19535) disA 4158908..4160032 (+) 1125 WP_327245732.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OH821_RS19580 (OH821_19540) - 4160265..4161083 (-) 819 WP_406420504.1 hypothetical protein -
  OH821_RS19585 (OH821_19545) - 4161259..4161402 (+) 144 WP_406420505.1 hypothetical protein -
  OH821_RS19590 - 4161617..4161934 (+) 318 WP_406420506.1 phosphatase PAP2 family protein -
  OH821_RS19595 (OH821_19555) - 4162231..4163133 (+) 903 WP_406420507.1 A/G-specific adenine glycosylase -
  OH821_RS19600 (OH821_19560) - 4163568..4164218 (+) 651 WP_406420508.1 SigE family RNA polymerase sigma factor -
  OH821_RS19605 (OH821_19565) - 4164206..4164952 (+) 747 WP_406420509.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40362.27 Da        Isoelectric Point: 4.9372

>NTDB_id=667546 OH821_RS19575 WP_327245732.1 4158908..4160032(+) (disA) [Streptomyces sp. NBC_00842]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMSKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=667546 OH821_RS19575 WP_327245732.1 4158908..4160032(+) (disA) [Streptomyces sp. NBC_00842]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCCGGAATGGCCTTGCGGGACGGCCTGGAGCGCATTCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TGGGCATGGACAAGACCGTCGAGTCCATGTGCACCGGCGGCTTCGTGCTGGATGTCGAATTCACCGCGACGCGACTGCGC
GAGCTGGCCAAGCTCGACGGAGCGCTGATCCTCGACAAGGACATGAGCAAGATCCTCCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATTCCCACCGAGGAGACCGGTACCCGCCACCGCACGGCGGATCGGGTCTCCAAGCAGTGCAACTTCCCTG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTGTCGCGCGCCAATCAGGCCCTCGCCACCCTGGAGCGGTACAAACTCCGGCTCGACGAGGTGGCGGGCACACTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTGACGGCCGTCGCACAGCGGCTGGAGATGGTGCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGTACCGACGGCCGGCTTCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCTGA
GGCGCTGACCGAGCTGGACGCGCTCTCTCACACCGAGTTGCTCGAACTGCCCGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCGCCCGAGACCCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGACTGCCCGGGGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGAGGACTGCAGAAGCTGCTCGCGGCGAGCGTGGACGATCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTCTCGCGGCTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436


Multiple sequence alignment