Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG16_RS00285 | Genome accession | NZ_CP094143 |
| Coordinates | 65350..65925 (+) | Length | 191 a.a. |
| NCBI ID | WP_245108553.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe032 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 60350..70925
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG16_RS00260 (MPG16_00260) | uvrD | 61041..63086 (+) | 2046 | WP_245108550.1 | DNA helicase UvrD | - |
| MPG16_RS00265 (MPG16_00265) | flgA | 63083..63739 (+) | 657 | WP_245108551.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG16_RS00270 (MPG16_00270) | - | 63749..64312 (+) | 564 | WP_180441109.1 | UbiX family flavin prenyltransferase | - |
| MPG16_RS00275 (MPG16_00275) | coaD | 64312..64785 (+) | 474 | WP_001169246.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG16_RS00280 (MPG16_00280) | tmk | 64787..65362 (+) | 576 | WP_245108552.1 | dTMP kinase | - |
| MPG16_RS00285 (MPG16_00285) | comFC | 65350..65925 (+) | 576 | WP_245108553.1 | ComF family protein | Machinery gene |
| MPG16_RS00290 (MPG16_00290) | - | 65958..67997 (+) | 2040 | WP_245108554.1 | N-6 DNA methylase | - |
| MPG16_RS00295 (MPG16_00295) | - | 67994..69226 (+) | 1233 | WP_245108555.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21276.93 Da Isoelectric Point: 9.1461
>NTDB_id=667526 MPG16_RS00285 WP_245108553.1 65350..65925(+) (comFC) [Helicobacter pylori strain Hpfe032]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKCLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKCLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667526 MPG16_RS00285 WP_245108553.1 65350..65925(+) (comFC) [Helicobacter pylori strain Hpfe032]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCCTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCTGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATGCCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCGCTTTG
CAGCGCAGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCCTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCTGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATGCCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCGCTTTG
CAGCGCAGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
38.021 |
100 |
0.382 |