Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG02_RS00255 | Genome accession | NZ_CP094142 |
| Coordinates | 57113..57688 (+) | Length | 191 a.a. |
| NCBI ID | WP_245075384.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe033 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52113..62688
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG02_RS00230 (MPG02_00230) | uvrD | 52804..54849 (+) | 2046 | WP_245075380.1 | DNA helicase UvrD | - |
| MPG02_RS00235 (MPG02_00235) | flgA | 54846..55502 (+) | 657 | WP_245075381.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG02_RS00240 (MPG02_00240) | - | 55512..56075 (+) | 564 | WP_245075382.1 | UbiX family flavin prenyltransferase | - |
| MPG02_RS00245 (MPG02_00245) | coaD | 56075..56548 (+) | 474 | WP_154451951.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG02_RS00250 (MPG02_00250) | tmk | 56550..57125 (+) | 576 | WP_245075383.1 | dTMP kinase | - |
| MPG02_RS00255 (MPG02_00255) | comFC | 57113..57688 (+) | 576 | WP_245075384.1 | ComF family protein | Machinery gene |
| MPG02_RS00260 (MPG02_00260) | - | 57720..59759 (+) | 2040 | WP_245075385.1 | N-6 DNA methylase | - |
| MPG02_RS00265 (MPG02_00265) | - | 59828..60415 (+) | 588 | WP_245075975.1 | restriction endonuclease subunit S | - |
| MPG02_RS00270 (MPG02_00270) | - | 60442..60999 (+) | 558 | WP_245075386.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21295.92 Da Isoelectric Point: 9.4390
>NTDB_id=667506 MPG02_RS00255 WP_245075384.1 57113..57688(+) (comFC) [Helicobacter pylori strain Hpfe033]
MRCLTCLKLSFKPLCSNCLNDLPLNLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDKSLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLNLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDKSLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667506 MPG02_RS00255 WP_245075384.1 57113..57688(+) (comFC) [Helicobacter pylori strain Hpfe033]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATCTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGATTAAGGGCTAATAATGCTGTTTCATATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAGTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATTAAAGCCCACTTTGCAATCGCGCTTTG
TAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATCTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGATTAAGGGCTAATAATGCTGTTTCATATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAGTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATTAAAGCCCACTTTGCAATCGCGCTTTG
TAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.269 |
100 |
0.366 |