Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG83_RS00255 | Genome accession | NZ_CP094140 |
| Coordinates | 58213..58788 (+) | Length | 191 a.a. |
| NCBI ID | WP_245071350.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe035 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 53213..63788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG83_RS00230 (MPG83_00230) | uvrD | 53904..55949 (+) | 2046 | WP_245071347.1 | DNA helicase UvrD | - |
| MPG83_RS00235 (MPG83_00235) | flgA | 55946..56602 (+) | 657 | WP_245071348.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG83_RS00240 (MPG83_00240) | - | 56612..57175 (+) | 564 | WP_017281022.1 | UbiX family flavin prenyltransferase | - |
| MPG83_RS00245 (MPG83_00245) | coaD | 57175..57648 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG83_RS00250 (MPG83_00250) | tmk | 57650..58225 (+) | 576 | WP_245071349.1 | dTMP kinase | - |
| MPG83_RS00255 (MPG83_00255) | comFC | 58213..58788 (+) | 576 | WP_245071350.1 | ComF family protein | Machinery gene |
| MPG83_RS00260 (MPG83_00260) | - | 58821..60857 (+) | 2037 | WP_245071351.1 | N-6 DNA methylase | - |
| MPG83_RS00265 (MPG83_00265) | - | 60854..62096 (+) | 1243 | Protein_51 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21361.04 Da Isoelectric Point: 9.4455
>NTDB_id=667485 MPG83_RS00255 WP_245071350.1 58213..58788(+) (comFC) [Helicobacter pylori strain Hpfe035]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLSIKVHFVIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLSIKVHFVIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667485 MPG83_RS00255 WP_245071350.1 58213..58788(+) (comFC) [Helicobacter pylori strain Hpfe035]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTAAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCTACTTATGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAGCATCAAAGTGCACTTTGTAATCGCACTTTG
TAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTAAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCTACTTATGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAGCATCAAAGTGCACTTTGTAATCGCACTTTG
TAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |