Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG936_RS15055 Genome accession   NZ_CP108846
Coordinates   3266320..3267444 (+) Length   374 a.a.
NCBI ID   WP_266746940.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00846     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3261320..3272444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG936_RS15040 (OG936_15050) - 3261803..3262645 (+) 843 WP_384455839.1 hypothetical protein -
  OG936_RS15045 (OG936_15055) - 3262704..3264611 (-) 1908 WP_406495242.1 BACON domain-containing protein -
  OG936_RS15050 (OG936_15060) radA/sms 3264827..3266239 (+) 1413 WP_406495244.1 DNA repair protein RadA Machinery gene
  OG936_RS15055 (OG936_15065) disA 3266320..3267444 (+) 1125 WP_266746940.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG936_RS15060 (OG936_15070) - 3267550..3268356 (-) 807 WP_406495247.1 hypothetical protein -
  OG936_RS15065 (OG936_15075) - 3268530..3269210 (+) 681 WP_406495249.1 phosphatase PAP2 family protein -
  OG936_RS15070 (OG936_15080) - 3269366..3270268 (+) 903 WP_383757097.1 A/G-specific adenine glycosylase -
  OG936_RS15075 (OG936_15085) - 3270437..3271087 (+) 651 WP_406495251.1 SigE family RNA polymerase sigma factor -
  OG936_RS15080 (OG936_15090) - 3271075..3271818 (+) 744 WP_406495253.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40379.30 Da        Isoelectric Point: 4.9372

>NTDB_id=667477 OG936_RS15055 WP_266746940.1 3266320..3267444(+) (disA) [Streptomyces sp. NBC_00846]
MAASDRAASPGKSGQGTGNETLMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=667477 OG936_RS15055 WP_266746940.1 3266320..3267444(+) (disA) [Streptomyces sp. NBC_00846]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGACGCTGATGCGCGCCTCATT
GAGCGCTGTCGCGCCCGGAATGGCGCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACGCGCCTGCGG
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTTCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAATCAGGCACTCGCCACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCACAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTGGAGTTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGA
GGCACTGACCGAGCTCGATGCGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCAAGGGCACTGGGATACAGCG
GCTCGCCGGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCC
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTGGACGACCTCCAGACGGTCGA
CGGGGTCGGCGAGGCGCGGGCGCGTAGCGTGCGCGAGGGACTGTCGCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436