Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG53_RS00285 | Genome accession | NZ_CP094139 |
| Coordinates | 61616..62191 (+) | Length | 191 a.a. |
| NCBI ID | WP_245060508.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe036 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 56616..67191
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG53_RS00260 (MPG53_00260) | uvrD | 57307..59352 (+) | 2046 | WP_245060501.1 | DNA helicase UvrD | - |
| MPG53_RS00265 (MPG53_00265) | flgA | 59349..60005 (+) | 657 | WP_245060503.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG53_RS00270 (MPG53_00270) | - | 60015..60578 (+) | 564 | WP_245060505.1 | UbiX family flavin prenyltransferase | - |
| MPG53_RS00275 (MPG53_00275) | coaD | 60578..61051 (+) | 474 | WP_245060506.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG53_RS00280 (MPG53_00280) | tmk | 61053..61628 (+) | 576 | WP_245060507.1 | dTMP kinase | - |
| MPG53_RS00285 (MPG53_00285) | comFC | 61616..62191 (+) | 576 | WP_245060508.1 | ComF family protein | Machinery gene |
| MPG53_RS00290 (MPG53_00290) | - | 62224..64263 (+) | 2040 | WP_245060509.1 | N-6 DNA methylase | - |
| MPG53_RS00295 (MPG53_00295) | - | 64260..64925 (+) | 666 | WP_245060510.1 | restriction endonuclease subunit S | - |
| MPG53_RS00300 (MPG53_00300) | - | 64970..65515 (+) | 546 | WP_245061310.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21348.90 Da Isoelectric Point: 8.8888
>NTDB_id=667464 MPG53_RS00285 WP_245060508.1 61616..62191(+) (comFC) [Helicobacter pylori strain Hpfe036]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667464 MPG53_RS00285 WP_245060508.1 61616..62191(+) (comFC) [Helicobacter pylori strain Hpfe036]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |