Detailed information NTG0667432

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG365_RS23515
• Genome accession: NZ_CP108837
• Coordinates: 5096435..5097721 (+)
• Length: 428 a.a.
• NCBI ID: WP_030008569.1
• Uniprot ID: A0ABQ3SUV3
• Organism: Streptomyces sp. NBC_00853
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5091435..5102721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG365_RS23485	-	5092534..5092659 (+)	126	WP_406738499.1	hypothetical protein	-
OG365_RS23500 (OG365_23510)	tig	5093235..5094668 (+)	1434	WP_406738500.1	trigger factor	-
OG365_RS23505 (OG365_23515)	-	5094945..5095562 (+)	618	WP_327385410.1	ATP-dependent Clp protease proteolytic subunit	-
OG365_RS23510 (OG365_23520)	clpP	5095616..5096281 (+)	666	WP_150257432.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG365_RS23515 (OG365_23525)	clpX	5096435..5097721 (+)	1287	WP_030008569.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG365_RS23520 (OG365_23530)	-	5097888..5098163 (+)	276	WP_327385411.1	hypothetical protein	-
OG365_RS23525 (OG365_23535)	-	5098218..5099153 (-)	936	WP_406738501.1	hypothetical protein	-
OG365_RS23530 (OG365_23540)	-	5099281..5101902 (+)	2622	WP_327385413.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46962.87 Da
• Isoelectric Point: 4.7778

>NTDB_id=667432 OG365_RS23515 WP_030008569.1 5096435..5097721(+) (clpX) [Streptomyces sp. NBC_00853]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SEVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=667432 OG365_RS23515 WP_030008569.1 5096435..5097721(+) (clpX) [Streptomyces sp. NBC_00853]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTTTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATTGAAGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTGCTCGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGTGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGACGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGT
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACT
TCGGAGGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCCCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.925	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519