Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG13_RS00265 | Genome accession | NZ_CP094137 |
| Coordinates | 60721..61296 (+) | Length | 191 a.a. |
| NCBI ID | WP_245083449.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe038 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55721..66296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG13_RS00240 (MPG13_00240) | uvrD | 56412..58457 (+) | 2046 | WP_245083439.1 | DNA helicase UvrD | - |
| MPG13_RS00245 (MPG13_00245) | flgA | 58454..59110 (+) | 657 | WP_245083442.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG13_RS00250 (MPG13_00250) | - | 59120..59683 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG13_RS00255 (MPG13_00255) | coaD | 59683..60156 (+) | 474 | WP_245083445.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG13_RS00260 (MPG13_00260) | tmk | 60158..60733 (+) | 576 | WP_245083447.1 | dTMP kinase | - |
| MPG13_RS00265 (MPG13_00265) | comFC | 60721..61296 (+) | 576 | WP_245083449.1 | ComF family protein | Machinery gene |
| MPG13_RS00270 (MPG13_00270) | - | 61329..63359 (+) | 2031 | WP_245083451.1 | N-6 DNA methylase | - |
| MPG13_RS00275 (MPG13_00275) | - | 63356..64564 (+) | 1209 | WP_245083453.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21297.85 Da Isoelectric Point: 8.8864
>NTDB_id=667424 MPG13_RS00265 WP_245083449.1 60721..61296(+) (comFC) [Helicobacter pylori strain Hpfe038]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667424 MPG13_RS00265 WP_245083449.1 60721..61296(+) (comFC) [Helicobacter pylori strain Hpfe038]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATTGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGCTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCTTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATTGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGCTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCTTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |