Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPF95_RS00290 | Genome accession | NZ_CP094136 |
| Coordinates | 64210..64785 (+) | Length | 191 a.a. |
| NCBI ID | WP_245067038.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe039 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59210..69785
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPF95_RS00265 (MPF95_00265) | uvrD | 59901..61946 (+) | 2046 | WP_245067030.1 | DNA helicase UvrD | - |
| MPF95_RS00270 (MPF95_00270) | flgA | 61943..62599 (+) | 657 | WP_245067032.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPF95_RS00275 (MPF95_00275) | - | 62609..63172 (+) | 564 | WP_245067034.1 | UbiX family flavin prenyltransferase | - |
| MPF95_RS00280 (MPF95_00280) | coaD | 63172..63645 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPF95_RS00285 (MPF95_00285) | tmk | 63647..64222 (+) | 576 | WP_245067036.1 | dTMP kinase | - |
| MPF95_RS00290 (MPF95_00290) | comFC | 64210..64785 (+) | 576 | WP_245067038.1 | ComF family protein | Machinery gene |
| MPF95_RS00295 (MPF95_00295) | - | 64818..66857 (+) | 2040 | WP_245067040.1 | N-6 DNA methylase | - |
| MPF95_RS07820 | - | 66854..68075 (+) | 1222 | Protein_58 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21367.94 Da Isoelectric Point: 8.8864
>NTDB_id=667401 MPF95_RS00290 WP_245067038.1 64210..64785(+) (comFC) [Helicobacter pylori strain Hpfe039]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRTNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRTNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667401 MPF95_RS00290 WP_245067038.1 64210..64785(+) (comFC) [Helicobacter pylori strain Hpfe039]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGCTTAAGGGCGACTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGCTTAAGGGCGACTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |