Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG50_RS00285 | Genome accession | NZ_CP094134 |
| Coordinates | 64156..64731 (+) | Length | 191 a.a. |
| NCBI ID | WP_245032272.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe048 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59156..69731
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG50_RS00260 (MPG50_00260) | uvrD | 59847..61892 (+) | 2046 | WP_245032266.1 | DNA helicase UvrD | - |
| MPG50_RS00265 (MPG50_00265) | flgA | 61889..62545 (+) | 657 | WP_245032268.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG50_RS00270 (MPG50_00270) | - | 62555..63118 (+) | 564 | WP_180422787.1 | UbiX family flavin prenyltransferase | - |
| MPG50_RS00275 (MPG50_00275) | coaD | 63118..63591 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG50_RS00280 (MPG50_00280) | tmk | 63593..64168 (+) | 576 | WP_245032270.1 | dTMP kinase | - |
| MPG50_RS00285 (MPG50_00285) | comFC | 64156..64731 (+) | 576 | WP_245032272.1 | ComF family protein | Machinery gene |
| MPG50_RS00290 (MPG50_00290) | - | 64764..66803 (+) | 2040 | WP_245032274.1 | N-6 DNA methylase | - |
| MPG50_RS00295 (MPG50_00295) | - | 66800..67450 (+) | 651 | WP_245032279.1 | restriction endonuclease subunit S | - |
| MPG50_RS00300 (MPG50_00300) | - | 67489..68040 (+) | 552 | WP_245032281.1 | N-6 DNA methylase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21396.98 Da Isoelectric Point: 8.8864
>NTDB_id=667358 MPG50_RS00285 WP_245032272.1 64156..64731(+) (comFC) [Helicobacter pylori strain Hpfe048]
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667358 MPG50_RS00285 WP_245032272.1 64156..64731(+) (comFC) [Helicobacter pylori strain Hpfe048]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCTGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAATCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATT
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCTGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAATCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATT
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
37.629 |
100 |
0.382 |