Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG584_RS14580 Genome accession   NZ_CP108826
Coordinates   3391467..3392618 (+) Length   383 a.a.
NCBI ID   WP_405778251.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00859     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3386467..3397618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG584_RS14565 (OG584_14565) - 3387049..3387849 (+) 801 WP_405778248.1 hypothetical protein -
  OG584_RS14570 (OG584_14570) - 3388128..3389840 (-) 1713 WP_405778249.1 BACON domain-containing protein -
  OG584_RS14575 (OG584_14575) radA/sms 3390013..3391410 (+) 1398 WP_405778250.1 DNA repair protein RadA Machinery gene
  OG584_RS14580 (OG584_14580) disA 3391467..3392618 (+) 1152 WP_405778251.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG584_RS14585 (OG584_14585) - 3392907..3393743 (-) 837 WP_405784073.1 hypothetical protein -
  OG584_RS14590 (OG584_14590) - 3393927..3394535 (+) 609 WP_405778252.1 phosphatase PAP2 family protein -
  OG584_RS14595 (OG584_14595) - 3394552..3395478 (+) 927 WP_405778253.1 A/G-specific adenine glycosylase -
  OG584_RS14600 (OG584_14600) - 3395756..3396307 (+) 552 WP_405778254.1 SigE family RNA polymerase sigma factor -
  OG584_RS14605 (OG584_14605) - 3396364..3397020 (+) 657 WP_405778255.1 hypothetical protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41192.15 Da        Isoelectric Point: 5.1161

>NTDB_id=667341 OG584_RS14580 WP_405778251.1 3391467..3392618(+) (disA) [Streptomyces sp. NBC_00859]
MAANDRAAPGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTSPRAASGRGPQRPRTVTEALVELNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLL
AKVPRLPGAIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=667341 OG584_RS14580 WP_405778251.1 3391467..3392618(+) (disA) [Streptomyces sp. NBC_00859]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCTGTCGCGCCCGGCACAGCGCTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TGGGCATGGACAAGAGCGTCGAAGCCATGTGCACCGGCGGCTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTCAGG
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCCGGTGTCCAGCTCGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCCGACCGTGTCTCCAAGCAGTGCGGCTTCCCGG
TCGTCTCCGTATCCCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCCACACTGGAGCGGTACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACAGCGGTCGCGCAGCGGCTCGAGATGGTCCGGCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCG
GGGGTCGAGCCGGAGCGGGAACTGGTGGTCAGGGACTACGTGCCGGAGCCGACGTCCCCCAGAGCGGCCTCCGGGAGGGG
CCCCCAGCGTCCGCGTACGGTCACCGAGGCGCTCGTCGAGCTGAACACGCTGAGCCACACGGAGCTGCTCGAACTGCCCG
TGGTGGCAAGGGCGCTGGGGTACAGCGGATCCCCCGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTG
GCGAAGGTGCCGCGGCTGCCCGGAGCGATCATCGAGCGTCTTGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCTGC
GAGCGTGGACGACCTGCAGACGGTGGACGGGGTCGGGGAGGCGCGGGCGCGCAGCGTACGGGAAGGGCTGTCGCGGCTCG
CGGAGTCTTCGATTCTGGAGCGGTACGTGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.455

94.778

0.431


Multiple sequence alignment