Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG21_RS00270 | Genome accession | NZ_CP094133 |
| Coordinates | 60847..61422 (+) | Length | 191 a.a. |
| NCBI ID | WP_245025401.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe049 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55847..66422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG21_RS00245 (MPG21_00245) | uvrD | 56538..58583 (+) | 2046 | WP_245025395.1 | DNA helicase UvrD | - |
| MPG21_RS00250 (MPG21_00250) | flgA | 58580..59236 (+) | 657 | WP_245025397.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG21_RS00255 (MPG21_00255) | - | 59246..59809 (+) | 564 | WP_033122203.1 | UbiX family flavin prenyltransferase | - |
| MPG21_RS00260 (MPG21_00260) | coaD | 59809..60282 (+) | 474 | WP_001169243.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG21_RS00265 (MPG21_00265) | tmk | 60284..60859 (+) | 576 | WP_245025399.1 | dTMP kinase | - |
| MPG21_RS00270 (MPG21_00270) | comFC | 60847..61422 (+) | 576 | WP_245025401.1 | ComF family protein | Machinery gene |
| MPG21_RS00275 (MPG21_00275) | - | 61455..63494 (+) | 2040 | Protein_53 | N-6 DNA methylase | - |
| MPG21_RS00280 (MPG21_00280) | - | 63491..64711 (+) | 1221 | WP_245025403.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21409.99 Da Isoelectric Point: 9.4519
>NTDB_id=667337 MPG21_RS00270 WP_245025401.1 60847..61422(+) (comFC) [Helicobacter pylori strain Hpfe049]
MRCLTCLKLSFKPLCSNCLNDLPLNLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLNLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667337 MPG21_RS00270 WP_245025401.1 60847..61422(+) (comFC) [Helicobacter pylori strain Hpfe049]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGTGAAATAGAAGAGCTCATTAAAAGTAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCGACTAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGTGAAATAGAAGAGCTCATTAAAAGTAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCGACTAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.241 |
100 |
0.942 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |