Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG57_RS00265 | Genome accession | NZ_CP094132 |
| Coordinates | 60552..61127 (+) | Length | 191 a.a. |
| NCBI ID | WP_245081158.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe051 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55552..66127
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG57_RS00240 (MPG57_00240) | uvrD | 56243..58288 (+) | 2046 | WP_245081151.1 | DNA helicase UvrD | - |
| MPG57_RS00245 (MPG57_00245) | flgA | 58285..58941 (+) | 657 | WP_245081153.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG57_RS00250 (MPG57_00250) | - | 58951..59514 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG57_RS00255 (MPG57_00255) | coaD | 59514..59987 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG57_RS00260 (MPG57_00260) | tmk | 59989..60564 (+) | 576 | WP_245081156.1 | dTMP kinase | - |
| MPG57_RS00265 (MPG57_00265) | comFC | 60552..61127 (+) | 576 | WP_245081158.1 | ComF family protein | Machinery gene |
| MPG57_RS00270 (MPG57_00270) | - | 61160..63199 (+) | 2040 | WP_245081160.1 | N-6 DNA methylase | - |
| MPG57_RS07820 | - | 63196..63834 (+) | 639 | WP_342370131.1 | restriction endonuclease subunit S | - |
| MPG57_RS07825 | - | 63861..64403 (+) | 543 | WP_342370132.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21325.86 Da Isoelectric Point: 9.0940
>NTDB_id=667317 MPG57_RS00265 WP_245081158.1 60552..61127(+) (comFC) [Helicobacter pylori strain Hpfe051]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEVEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEVEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667317 MPG57_RS00265 WP_245081158.1 60552..61127(+) (comFC) [Helicobacter pylori strain Hpfe051]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGAGTGAGCGTATATAGTTTTTACGCTTATAGCGAAGTAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCTCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGAGTGAGCGTATATAGTTTTTACGCTTATAGCGAAGTAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCTCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |