Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG30_RS00260 | Genome accession | NZ_CP094131 |
| Coordinates | 58333..58908 (+) | Length | 191 a.a. |
| NCBI ID | WP_245047814.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe052 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 53333..63908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG30_RS00235 (MPG30_00235) | uvrD | 54024..56069 (+) | 2046 | WP_245047806.1 | DNA helicase UvrD | - |
| MPG30_RS00240 (MPG30_00240) | flgA | 56066..56722 (+) | 657 | WP_245047808.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG30_RS00245 (MPG30_00245) | - | 56732..57295 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG30_RS00250 (MPG30_00250) | coaD | 57295..57768 (+) | 474 | WP_245047810.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG30_RS00255 (MPG30_00255) | tmk | 57770..58345 (+) | 576 | WP_245047812.1 | dTMP kinase | - |
| MPG30_RS00260 (MPG30_00260) | comFC | 58333..58908 (+) | 576 | WP_245047814.1 | ComF family protein | Machinery gene |
| MPG30_RS00265 (MPG30_00265) | - | 58941..60977 (+) | 2037 | WP_245047816.1 | N-6 DNA methylase | - |
| MPG30_RS00270 (MPG30_00270) | - | 60974..61615 (+) | 642 | WP_245047818.1 | restriction endonuclease subunit S | - |
| MPG30_RS00275 (MPG30_00275) | - | 61612..62184 (+) | 573 | WP_245047819.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21352.97 Da Isoelectric Point: 9.2796
>NTDB_id=667296 MPG30_RS00260 WP_245047814.1 58333..58908(+) (comFC) [Helicobacter pylori strain Hpfe052]
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667296 MPG30_RS00260 WP_245047814.1 58333..58908(+) (comFC) [Helicobacter pylori strain Hpfe052]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCAAAGAATTTGTGAAAATCTTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATTGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAATATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCAAAGAATTTGTGAAAATCTTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATTGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAATATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.598 |
100 |
0.372 |