Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SAJPND1_RS10705 | Genome accession | NZ_AP014652 |
| Coordinates | 2124054..2124449 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TMUS2126 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2119054..2129449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAJPND1_RS10680 (AXW71_RS10650) | thiE | 2119652..2120293 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| SAJPND1_RS10685 (AXW71_RS10655) | thiM | 2120295..2121086 (-) | 792 | WP_001108489.1 | hydroxyethylthiazole kinase | - |
| SAJPND1_RS10690 (AXW71_RS10660) | thiD | 2121070..2121900 (-) | 831 | WP_000594951.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SAJPND1_RS10695 (AXW71_RS10665) | tenA | 2121893..2122582 (-) | 690 | WP_000396064.1 | thiaminase II | - |
| SAJPND1_RS10700 (AXW71_RS10670) | sceD | 2122970..2123665 (-) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| SAJPND1_RS10705 (AXW71_RS10675) | ssb | 2124054..2124449 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SAJPND1_RS10710 (AXW71_RS10680) | - | 2124643..2125083 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SAJPND1_RS10715 (AXW71_RS10685) | fabZ | 2125141..2125581 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SAJPND1_RS10720 (AXW71_RS10690) | murA | 2125615..2126880 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SAJPND1_RS10725 (AXW71_RS10695) | - | 2126991..2127224 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| SAJPND1_RS10730 (AXW71_RS10700) | - | 2127356..2127448 (-) | 93 | WP_031824610.1 | hypothetical protein | - |
| SAJPND1_RS10735 (AXW71_RS10705) | - | 2127784..2128188 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=66727 SAJPND1_RS10705 WP_000932694.1 2124054..2124449(-) (ssb) [Staphylococcus aureus strain TMUS2126]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=66727 SAJPND1_RS10705 WP_000932694.1 2124054..2124449(-) (ssb) [Staphylococcus aureus strain TMUS2126]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |