Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG85_RS00280 | Genome accession | NZ_CP094129 |
| Coordinates | 63577..64152 (+) | Length | 191 a.a. |
| NCBI ID | WP_245050748.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe054 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58577..69152
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG85_RS00255 (MPG85_00255) | uvrD | 59268..61313 (+) | 2046 | WP_245050742.1 | DNA helicase UvrD | - |
| MPG85_RS00260 (MPG85_00260) | flgA | 61310..61966 (+) | 657 | WP_220823620.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG85_RS00265 (MPG85_00265) | - | 61976..62539 (+) | 564 | WP_000780123.1 | UbiX family flavin prenyltransferase | - |
| MPG85_RS00270 (MPG85_00270) | coaD | 62539..63012 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG85_RS00275 (MPG85_00275) | tmk | 63014..63589 (+) | 576 | WP_245050746.1 | dTMP kinase | - |
| MPG85_RS00280 (MPG85_00280) | comFC | 63577..64152 (+) | 576 | WP_245050748.1 | ComF family protein | Machinery gene |
| MPG85_RS00285 (MPG85_00285) | - | 64185..66224 (+) | 2040 | WP_245050750.1 | N-6 DNA methylase | - |
| MPG85_RS00290 (MPG85_00290) | - | 66221..67481 (+) | 1261 | Protein_56 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21338.90 Da Isoelectric Point: 8.8864
>NTDB_id=667252 MPG85_RS00280 WP_245050748.1 63577..64152(+) (comFC) [Helicobacter pylori strain Hpfe054]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRVNNPRDFTFKGDEALDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRVNNPRDFTFKGDEALDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667252 MPG85_RS00280 WP_245050748.1 63577..64152(+) (comFC) [Helicobacter pylori strain Hpfe054]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAGAGCAAATACG
CGCTGATTGGATCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGTCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAGCTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAATATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAGAGCAAATACG
CGCTGATTGGATCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGTCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAGCTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAATATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |