Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG79_RS00290 | Genome accession | NZ_CP094128 |
| Coordinates | 66342..66917 (+) | Length | 191 a.a. |
| NCBI ID | WP_245107508.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe055 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 61342..71917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG79_RS00265 (MPG79_00265) | uvrD | 62033..64078 (+) | 2046 | WP_245107505.1 | DNA helicase UvrD | - |
| MPG79_RS00270 (MPG79_00270) | flgA | 64075..64731 (+) | 657 | WP_245107506.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG79_RS00275 (MPG79_00275) | - | 64741..65304 (+) | 564 | WP_000780123.1 | UbiX family flavin prenyltransferase | - |
| MPG79_RS00280 (MPG79_00280) | coaD | 65304..65777 (+) | 474 | WP_180432490.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG79_RS00285 (MPG79_00285) | tmk | 65779..66354 (+) | 576 | WP_245107507.1 | dTMP kinase | - |
| MPG79_RS00290 (MPG79_00290) | comFC | 66342..66917 (+) | 576 | WP_245107508.1 | ComF family protein | Machinery gene |
| MPG79_RS00295 (MPG79_00295) | - | 66950..68989 (+) | 2040 | WP_245107509.1 | N-6 DNA methylase | - |
| MPG79_RS00300 (MPG79_00300) | - | 68986..69609 (+) | 624 | WP_245107510.1 | restriction endonuclease subunit S | - |
| MPG79_RS00305 (MPG79_00305) | - | 69636..70067 (+) | 432 | WP_245107511.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21293.90 Da Isoelectric Point: 9.0940
>NTDB_id=667232 MPG79_RS00290 WP_245107508.1 66342..66917(+) (comFC) [Helicobacter pylori strain Hpfe055]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGRLRAANAVSYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGRLRAANAVSYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667232 MPG79_RS00290 WP_245107508.1 66342..66917(+) (comFC) [Helicobacter pylori strain Hpfe055]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
96.335 |
100 |
0.963 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |