Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG01_RS00275 | Genome accession | NZ_CP094124 |
| Coordinates | 62769..63344 (+) | Length | 191 a.a. |
| NCBI ID | WP_245037691.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe057 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57769..68344
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG01_RS00250 (MPG01_00250) | uvrD | 58460..60505 (+) | 2046 | WP_245037683.1 | DNA helicase UvrD | - |
| MPG01_RS00255 (MPG01_00255) | flgA | 60502..61158 (+) | 657 | WP_245037685.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG01_RS00260 (MPG01_00260) | - | 61168..61731 (+) | 564 | WP_000780125.1 | UbiX family flavin prenyltransferase | - |
| MPG01_RS00265 (MPG01_00265) | coaD | 61731..62204 (+) | 474 | WP_245037687.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG01_RS00270 (MPG01_00270) | tmk | 62206..62781 (+) | 576 | WP_245037689.1 | dTMP kinase | - |
| MPG01_RS00275 (MPG01_00275) | comFC | 62769..63344 (+) | 576 | WP_245037691.1 | ComF family protein | Machinery gene |
| MPG01_RS00280 (MPG01_00280) | - | 63376..65416 (+) | 2041 | Protein_54 | N-6 DNA methylase | - |
| MPG01_RS07645 | - | 65413..66030 (+) | 618 | WP_342370268.1 | restriction endonuclease subunit S | - |
| MPG01_RS07650 | - | 66008..66616 (+) | 609 | WP_342370269.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21344.95 Da Isoelectric Point: 9.0901
>NTDB_id=667187 MPG01_RS00275 WP_245037691.1 62769..63344(+) (comFC) [Helicobacter pylori strain Hpfe057]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTIPLYGIAIDDKIKSFYSHSATLLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTIPLYGIAIDDKIKSFYSHSATLLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNTKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667187 MPG01_RS00275 WP_245037691.1 62769..63344(+) (comFC) [Helicobacter pylori strain Hpfe057]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCACGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGTCTGG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAGGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCACGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGTCTGG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAGGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
93.717 |
100 |
0.937 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
37.5 |
100 |
0.377 |