Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG704_RS14560 Genome accession   NZ_CP108812
Coordinates   3329900..3331024 (+) Length   374 a.a.
NCBI ID   WP_026171409.1    Uniprot ID   A0ABY6PU31
Organism   Streptomyces sp. NBC_00869     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3324900..3336024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG704_RS14545 (OG704_14555) - 3325448..3326329 (+) 882 WP_329026579.1 hypothetical protein -
  OG704_RS14550 (OG704_14560) - 3326343..3328205 (-) 1863 WP_330452658.1 hypothetical protein -
  OG704_RS14555 (OG704_14565) radA/sms 3328341..3329753 (+) 1413 WP_018520499.1 DNA repair protein RadA Machinery gene
  OG704_RS14560 (OG704_14570) disA 3329900..3331024 (+) 1125 WP_026171409.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG704_RS14565 (OG704_14575) - 3331074..3331844 (-) 771 WP_330455191.1 hypothetical protein -
  OG704_RS14570 (OG704_14580) - 3332178..3333080 (+) 903 WP_093708251.1 A/G-specific adenine glycosylase -
  OG704_RS14575 (OG704_14585) - 3333397..3333945 (+) 549 WP_018520495.1 SigE family RNA polymerase sigma factor -
  OG704_RS14580 (OG704_14590) - 3333933..3334652 (+) 720 WP_330452659.1 hypothetical protein -
  OG704_RS14585 (OG704_14595) cseB 3334663..3335367 (+) 705 WP_164644028.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40422.37 Da        Isoelectric Point: 5.0161

>NTDB_id=667174 OG704_RS14560 WP_026171409.1 3329900..3331024(+) (disA) [Streptomyces sp. NBC_00869]
MAASDRAASPGKSGQTTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=667174 OG704_RS14560 WP_026171409.1 3329900..3331024(+) (disA) [Streptomyces sp. NBC_00869]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAACCACCGGTAACGAGGCGCTCATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGGGGTCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTCGCCAAGCTCGACGGGGCTCTGATTCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTGGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTGGAGCTCGGCACCGACGGGCGGCTGCTGTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGGGACTATGTGCCGGAGCCGACCGCGAAGCGTTCGCGCACGGTGGCGGA
GGCGCTGACCGAGCTGGACTCGCTGACCCACACGGAGCTGCTCGAACTCCCGGTGGTGGCGAGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCCCGCGCGCGCAGCGTGCGCGAGGGCCTGTCCCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43