Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG73_RS00295 | Genome accession | NZ_CP094122 |
| Coordinates | 64028..64603 (+) | Length | 191 a.a. |
| NCBI ID | WP_245057129.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe058 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59028..69603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG73_RS00270 (MPG73_00270) | uvrD | 59719..61764 (+) | 2046 | WP_245057124.1 | DNA helicase UvrD | - |
| MPG73_RS00275 (MPG73_00275) | flgA | 61761..62417 (+) | 657 | WP_245057125.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG73_RS00280 (MPG73_00280) | - | 62427..62990 (+) | 564 | WP_220958595.1 | UbiX family flavin prenyltransferase | - |
| MPG73_RS00285 (MPG73_00285) | coaD | 62990..63463 (+) | 474 | WP_180612504.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG73_RS00290 (MPG73_00290) | tmk | 63465..64040 (+) | 576 | WP_245057127.1 | dTMP kinase | - |
| MPG73_RS00295 (MPG73_00295) | comFC | 64028..64603 (+) | 576 | WP_245057129.1 | ComF family protein | Machinery gene |
| MPG73_RS00300 (MPG73_00300) | - | 64636..66675 (+) | 2040 | Protein_56 | N-6 DNA methylase | - |
| MPG73_RS07895 (MPG73_00305) | - | 66672..67268 (+) | 597 | WP_245057131.1 | restriction endonuclease subunit S | - |
| MPG73_RS07900 (MPG73_00310) | - | 67341..67934 (+) | 594 | Protein_58 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21395.95 Da Isoelectric Point: 8.8889
>NTDB_id=667165 MPG73_RS00295 WP_245057129.1 64028..64603(+) (comFC) [Helicobacter pylori strain Hpfe058]
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667165 MPG73_RS00295 WP_245057129.1 64028..64603(+) (comFC) [Helicobacter pylori strain Hpfe058]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAGATCCTGCAAGAACAAGGC
TTGACTACCCCCCTTTATGGCATCGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGCCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCACTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAATTTGTGAAGATCCTGCAAGAACAAGGC
TTGACTACCCCCCTTTATGGCATCGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGCCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCACTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
39.175 |
100 |
0.398 |