Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG25_RS00270 | Genome accession | NZ_CP094121 |
| Coordinates | 60462..61037 (+) | Length | 191 a.a. |
| NCBI ID | WP_245018770.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe059 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55462..66037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG25_RS00245 (MPG25_00245) | uvrD | 56153..58198 (+) | 2046 | WP_245018766.1 | DNA helicase UvrD | - |
| MPG25_RS00250 (MPG25_00250) | flgA | 58195..58851 (+) | 657 | WP_245018767.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG25_RS00255 (MPG25_00255) | - | 58861..59424 (+) | 564 | WP_154500262.1 | UbiX family flavin prenyltransferase | - |
| MPG25_RS00260 (MPG25_00260) | coaD | 59424..59897 (+) | 474 | WP_245018768.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG25_RS00265 (MPG25_00265) | tmk | 59899..60474 (+) | 576 | WP_245018769.1 | dTMP kinase | - |
| MPG25_RS00270 (MPG25_00270) | comFC | 60462..61037 (+) | 576 | WP_245018770.1 | ComF family protein | Machinery gene |
| MPG25_RS00275 (MPG25_00275) | - | 61070..63108 (+) | 2039 | Protein_53 | N-6 DNA methylase | - |
| MPG25_RS00280 (MPG25_00280) | - | 63105..64328 (+) | 1224 | WP_245018771.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21378.97 Da Isoelectric Point: 8.8838
>NTDB_id=667145 MPG25_RS00270 WP_245018770.1 60462..61037(+) (comFC) [Helicobacter pylori strain Hpfe059]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKD
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKD
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667145 MPG25_RS00270 WP_245018770.1 60462..61037(+) (comFC) [Helicobacter pylori strain Hpfe059]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTAAAAGAAAAAGAC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTAAAAGAAAAAGAC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
37.436 |
100 |
0.382 |