Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG78_RS00260 | Genome accession | NZ_CP094119 |
| Coordinates | 59763..60338 (+) | Length | 191 a.a. |
| NCBI ID | WP_245040213.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe064 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 54763..65338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG78_RS00235 (MPG78_00235) | uvrD | 55454..57499 (+) | 2046 | WP_245040210.1 | DNA helicase UvrD | - |
| MPG78_RS00240 (MPG78_00240) | flgA | 57496..58152 (+) | 657 | WP_245040211.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG78_RS00245 (MPG78_00245) | - | 58162..58725 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG78_RS00250 (MPG78_00250) | coaD | 58725..59198 (+) | 474 | WP_001169261.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG78_RS00255 (MPG78_00255) | tmk | 59200..59775 (+) | 576 | WP_245040212.1 | dTMP kinase | - |
| MPG78_RS00260 (MPG78_00260) | comFC | 59763..60338 (+) | 576 | WP_245040213.1 | ComF family protein | Machinery gene |
| MPG78_RS00265 (MPG78_00265) | - | 60371..62410 (+) | 2040 | WP_245040214.1 | N-6 DNA methylase | - |
| MPG78_RS00270 (MPG78_00270) | - | 62407..63638 (+) | 1232 | Protein_53 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21309.91 Da Isoelectric Point: 9.2796
>NTDB_id=667105 MPG78_RS00260 WP_245040213.1 59763..60338(+) (comFC) [Helicobacter pylori strain Hpfe064]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTTLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTTLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667105 MPG78_RS00260 WP_245040213.1 59763..60338(+) (comFC) [Helicobacter pylori strain Hpfe064]
ATGCGTTGTTTAACCTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTAAATACCACCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACCTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTAAATACCACCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
96.335 |
100 |
0.963 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |