Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG80_RS00260 | Genome accession | NZ_CP094115 |
| Coordinates | 60669..61244 (+) | Length | 191 a.a. |
| NCBI ID | WP_245055599.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe068 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55669..66244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG80_RS00235 (MPG80_00235) | uvrD | 56360..58405 (+) | 2046 | WP_245055590.1 | DNA helicase UvrD | - |
| MPG80_RS00240 (MPG80_00240) | flgA | 58402..59058 (+) | 657 | WP_245055592.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG80_RS00245 (MPG80_00245) | - | 59068..59631 (+) | 564 | WP_033122203.1 | UbiX family flavin prenyltransferase | - |
| MPG80_RS00250 (MPG80_00250) | coaD | 59631..60104 (+) | 474 | WP_245055595.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG80_RS00255 (MPG80_00255) | tmk | 60106..60681 (+) | 576 | WP_245055597.1 | dTMP kinase | - |
| MPG80_RS00260 (MPG80_00260) | comFC | 60669..61244 (+) | 576 | WP_245055599.1 | ComF family protein | Machinery gene |
| MPG80_RS00265 (MPG80_00265) | - | 61277..63295 (+) | 2019 | WP_245055601.1 | N-6 DNA methylase | - |
| MPG80_RS00270 (MPG80_00270) | - | 63292..64541 (+) | 1250 | Protein_52 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21306.95 Da Isoelectric Point: 9.2796
>NTDB_id=667043 MPG80_RS00260 WP_245055599.1 60669..61244(+) (comFC) [Helicobacter pylori strain Hpfe068]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKALNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKALNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667043 MPG80_RS00260 WP_245055599.1 60669..61244(+) (comFC) [Helicobacter pylori strain Hpfe068]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAGCCCTAAACATCAAAGCGCACTTTGCAATCGCACTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAGCCCTAAACATCAAAGCGCACTTTGCAATCGCACTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |