Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG48_RS00270 | Genome accession | NZ_CP094113 |
| Coordinates | 60691..61266 (+) | Length | 191 a.a. |
| NCBI ID | WP_245065371.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe069 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55691..66266
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG48_RS00245 (MPG48_00245) | uvrD | 56382..58427 (+) | 2046 | WP_245065367.1 | DNA helicase UvrD | - |
| MPG48_RS00250 (MPG48_00250) | flgA | 58424..59080 (+) | 657 | WP_245065368.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG48_RS00255 (MPG48_00255) | - | 59090..59653 (+) | 564 | WP_245065369.1 | UbiX family flavin prenyltransferase | - |
| MPG48_RS00260 (MPG48_00260) | coaD | 59653..60126 (+) | 474 | WP_001169260.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG48_RS00265 (MPG48_00265) | tmk | 60128..60703 (+) | 576 | WP_245065370.1 | dTMP kinase | - |
| MPG48_RS00270 (MPG48_00270) | comFC | 60691..61266 (+) | 576 | WP_245065371.1 | ComF family protein | Machinery gene |
| MPG48_RS00275 (MPG48_00275) | - | 61288..62748 (-) | 1461 | WP_245065372.1 | hypothetical protein | - |
| MPG48_RS00280 (MPG48_00280) | - | 62811..63950 (-) | 1140 | WP_050835218.1 | DNA methyltransferase | - |
| MPG48_RS00285 (MPG48_00285) | - | 63954..64961 (-) | 1008 | WP_050835217.1 | DNA adenine methylase | - |
| MPG48_RS00290 (MPG48_00290) | - | 64958..65197 (-) | 240 | WP_000777864.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21390.98 Da Isoelectric Point: 9.2848
>NTDB_id=667020 MPG48_RS00270 WP_245065371.1 60691..61266(+) (comFC) [Helicobacter pylori strain Hpfe069]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667020 MPG48_RS00270 WP_245065371.1 60691..61266(+) (comFC) [Helicobacter pylori strain Hpfe069]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGAGCTAATAATACTATTTCGTATGCTGGAAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAGGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCCCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGAGCTAATAATACTATTTCGTATGCTGGAAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAGGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCCCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |