Detailed information NTG0666986

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OH809_RS28535
• Genome accession: NZ_CP108803
• Coordinates: 6186588..6187886 (+)
• Length: 432 a.a.
• NCBI ID: WP_030921263.1
• Uniprot ID: A0ABV2UFH0
• Organism: Streptomyces sp. NBC_00873
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6181588..6192886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH809_RS28505 (OH809_28540)	-	6182655..6182849 (+)	195	WP_037698756.1	hypothetical protein	-
OH809_RS28520 (OH809_28555)	tig	6183402..6184796 (+)	1395	WP_406419409.1	trigger factor	-
OH809_RS28525 (OH809_28560)	-	6185094..6185699 (+)	606	WP_051956806.1	ATP-dependent Clp protease proteolytic subunit	-
OH809_RS28530 (OH809_28565)	clpP	6185747..6186430 (+)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH809_RS28535 (OH809_28570)	clpX	6186588..6187886 (+)	1299	WP_030921263.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OH809_RS28540 (OH809_28575)	-	6187962..6189008 (-)	1047	WP_406419407.1	hypothetical protein	-
OH809_RS28545 (OH809_28580)	-	6189149..6191770 (+)	2622	WP_406419405.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47270.09 Da
• Isoelectric Point: 4.8824

>NTDB_id=666986 OH809_RS28535 WP_030921263.1 6186588..6187886(+) (clpX) [Streptomyces sp. NBC_00873]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=666986 OH809_RS28535 WP_030921263.1 6186588..6187886(+) (clpX) [Streptomyces sp. NBC_00873]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
CGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCGTTCGCCGGTCTGGAGCGGATCATCGAATCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACTTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCGGCGCTGGAGGCCATCGCCGACCAGGCGATTCTGCGCGGCACCGGCGCGCGCGGTCTGC
GGGCCATCATGGAAGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACA
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509