Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG24_RS00270 | Genome accession | NZ_CP094110 |
| Coordinates | 60315..60890 (+) | Length | 191 a.a. |
| NCBI ID | WP_245104247.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe071 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55315..65890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG24_RS00245 (MPG24_00245) | uvrD | 56006..58051 (+) | 2046 | WP_245104243.1 | DNA helicase UvrD | - |
| MPG24_RS00250 (MPG24_00250) | flgA | 58048..58704 (+) | 657 | WP_245104244.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG24_RS00255 (MPG24_00255) | - | 58714..59277 (+) | 564 | WP_000780125.1 | UbiX family flavin prenyltransferase | - |
| MPG24_RS00260 (MPG24_00260) | coaD | 59277..59750 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG24_RS00265 (MPG24_00265) | tmk | 59752..60327 (+) | 576 | WP_245104245.1 | dTMP kinase | - |
| MPG24_RS00270 (MPG24_00270) | comFC | 60315..60890 (+) | 576 | WP_245104247.1 | ComF family protein | Machinery gene |
| MPG24_RS00275 (MPG24_00275) | - | 60923..62962 (+) | 2040 | WP_245104249.1 | N-6 DNA methylase | - |
| MPG24_RS00280 (MPG24_00280) | - | 62959..63621 (+) | 663 | WP_245104251.1 | restriction endonuclease subunit S | - |
| MPG24_RS00285 (MPG24_00285) | - | 63593..64228 (+) | 636 | WP_245104252.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21374.02 Da Isoelectric Point: 8.7493
>NTDB_id=666973 MPG24_RS00270 WP_245104247.1 60315..60890(+) (comFC) [Helicobacter pylori strain Hpfe071]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYMLIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRTNNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYMLIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRTNNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666973 MPG24_RS00270 WP_245104247.1 60315..60890(+) (comFC) [Helicobacter pylori strain Hpfe071]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACA
TGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGTGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACTGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACA
TGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGTGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACTGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |