Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG17_RS00270 | Genome accession | NZ_CP094107 |
| Coordinates | 60738..61313 (+) | Length | 191 a.a. |
| NCBI ID | WP_245017905.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe074 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55738..66313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG17_RS00245 (MPG17_00245) | uvrD | 56429..58474 (+) | 2046 | WP_245017901.1 | DNA helicase UvrD | - |
| MPG17_RS00250 (MPG17_00250) | flgA | 58471..59127 (+) | 657 | WP_245017902.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG17_RS00255 (MPG17_00255) | - | 59137..59700 (+) | 564 | WP_245017903.1 | UbiX family flavin prenyltransferase | - |
| MPG17_RS00260 (MPG17_00260) | coaD | 59700..60173 (+) | 474 | WP_154508494.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG17_RS00265 (MPG17_00265) | tmk | 60175..60750 (+) | 576 | WP_245017904.1 | dTMP kinase | - |
| MPG17_RS00270 (MPG17_00270) | comFC | 60738..61313 (+) | 576 | WP_245017905.1 | ComF family protein | Machinery gene |
| MPG17_RS00275 (MPG17_00275) | - | 61346..63385 (+) | 2040 | WP_245017906.1 | N-6 DNA methylase | - |
| MPG17_RS00280 (MPG17_00280) | - | 63382..64059 (+) | 678 | WP_245017907.1 | restriction endonuclease subunit S | - |
| MPG17_RS00285 (MPG17_00285) | - | 64086..64643 (+) | 558 | WP_245017908.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21307.89 Da Isoelectric Point: 8.8864
>NTDB_id=666932 MPG17_RS00270 WP_245017905.1 60738..61313(+) (comFC) [Helicobacter pylori strain Hpfe074]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666932 MPG17_RS00270 WP_245017905.1 60738..61313(+) (comFC) [Helicobacter pylori strain Hpfe074]
ATGCGTTGTTTGACTTGTCTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGCTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGTACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTCTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGCTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGTACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |