Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPF92_RS00350 | Genome accession | NZ_CP094106 |
| Coordinates | 87871..88446 (+) | Length | 191 a.a. |
| NCBI ID | WP_245023899.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe075 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 82871..93446
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPF92_RS00325 (MPF92_00325) | uvrD | 83562..85607 (+) | 2046 | WP_245023896.1 | DNA helicase UvrD | - |
| MPF92_RS00330 (MPF92_00330) | flgA | 85604..86260 (+) | 657 | WP_245023897.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPF92_RS00335 (MPF92_00335) | - | 86270..86833 (+) | 564 | WP_217600576.1 | UbiX family flavin prenyltransferase | - |
| MPF92_RS00340 (MPF92_00340) | coaD | 86833..87306 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPF92_RS00345 (MPF92_00345) | tmk | 87308..87883 (+) | 576 | WP_245023898.1 | dTMP kinase | - |
| MPF92_RS00350 (MPF92_00350) | comFC | 87871..88446 (+) | 576 | WP_245023899.1 | ComF family protein | Machinery gene |
| MPF92_RS00355 (MPF92_00355) | - | 88479..90518 (+) | 2040 | WP_245023900.1 | N-6 DNA methylase | - |
| MPF92_RS00360 (MPF92_00360) | - | 90515..91768 (+) | 1254 | WP_245023901.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21417.95 Da Isoelectric Point: 8.8864
>NTDB_id=666910 MPF92_RS00350 WP_245023899.1 87871..88446(+) (comFC) [Helicobacter pylori strain Hpfe075]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYTLIGSRILPLLSQKAGTEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRTNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYTLIGSRILPLLSQKAGTEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRTNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666910 MPF92_RS00350 WP_245023899.1 87871..88446(+) (comFC) [Helicobacter pylori strain Hpfe075]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACA
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCACAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATTAAAGCGCACTTTGCGATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACA
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCACAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATTAAAGCGCACTTTGCGATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
93.194 |
100 |
0.932 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.938 |
100 |
0.361 |