Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG65_RS00275 | Genome accession | NZ_CP094105 |
| Coordinates | 62956..63531 (+) | Length | 191 a.a. |
| NCBI ID | WP_245072190.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe076 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57956..68531
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG65_RS00250 (MPG65_00250) | uvrD | 58647..60692 (+) | 2046 | WP_245072186.1 | DNA helicase UvrD | - |
| MPG65_RS00255 (MPG65_00255) | flgA | 60689..61345 (+) | 657 | WP_245072188.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG65_RS00260 (MPG65_00260) | - | 61355..61918 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG65_RS00265 (MPG65_00265) | coaD | 61918..62391 (+) | 474 | WP_120886657.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG65_RS00270 (MPG65_00270) | tmk | 62393..62968 (+) | 576 | WP_245072189.1 | dTMP kinase | - |
| MPG65_RS00275 (MPG65_00275) | comFC | 62956..63531 (+) | 576 | WP_245072190.1 | ComF family protein | Machinery gene |
| MPG65_RS00280 (MPG65_00280) | - | 63564..65594 (+) | 2031 | WP_245072191.1 | N-6 DNA methylase | - |
| MPG65_RS00285 (MPG65_00285) | - | 65591..66835 (+) | 1245 | WP_245072192.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21348.94 Da Isoelectric Point: 9.2796
>NTDB_id=666889 MPG65_RS00275 WP_245072190.1 62956..63531(+) (comFC) [Helicobacter pylori strain Hpfe076]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSATLLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRNFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSTDE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNAPLYGIAIDDKIKSFYSHSATLLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRNFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSTDE
Nucleotide
Download Length: 576 bp
>NTDB_id=666889 MPG65_RS00275 WP_245072190.1 62956..63531(+) (comFC) [Helicobacter pylori strain Hpfe076]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTAAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCACGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAGATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCACGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTAAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCACGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAGATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCACGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
96.335 |
100 |
0.963 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.508 |
98.953 |
0.361 |