Detailed information NTG0666792

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG69_RS00720
• Genome accession: NZ_CP094096
• Coordinates: 151430..152392 (+)
• Length: 320 a.a.
• NCBI ID: WP_180506423.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe082
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 146430..157392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG69_RS00690 (MPG69_00690)	panD	147839..148189 (+)	351	WP_000142212.1	aspartate 1-decarboxylase	-
MPG69_RS00695 (MPG69_00695)	-	148200..148493 (+)	294	WP_000347917.1	YbaB/EbfC family nucleoid-associated protein	-
MPG69_RS00700 (MPG69_00700)	-	148493..149488 (+)	996	WP_245056706.1	PDZ domain-containing protein	-
MPG69_RS00705 (MPG69_00705)	comB6	149494..150549 (+)	1056	WP_245056708.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG69_RS00710 (MPG69_00710)	comB7	150565..150690 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG69_RS00715 (MPG69_00715)	comB8	150687..151430 (+)	744	WP_000660533.1	virB8 family protein	Machinery gene
MPG69_RS00720 (MPG69_00720)	comB9	151430..152392 (+)	963	WP_180506423.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG69_RS00725 (MPG69_00725)	comB10	152385..153521 (+)	1137	WP_245056015.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG69_RS00730 (MPG69_00730)	-	153587..154999 (+)	1413	WP_245056017.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG69_RS00735 (MPG69_00735)	gmd	155013..156158 (+)	1146	WP_245056019.1	GDP-mannose 4,6-dehydratase	-
MPG69_RS00740 (MPG69_00740)	-	156151..157083 (+)	933	WP_245056023.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 36771.36 Da
• Isoelectric Point: 9.3756

>NTDB_id=666792 MPG69_RS00720 WP_180506423.1 151430..152392(+) (comB9) [Helicobacter pylori strain Hpfe082]
MRKVLCTLVGFLLAFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTLEKAPTNNKPLKEEKEETKEEETITIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKSK
LSLMPEEIFNDKQFTYFKFDKKLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFIKKGKDE

Nucleotide

• Length: 963 bp

>NTDB_id=666792 MPG69_RS00720 WP_180506423.1 151430..152392(+) (comB9) [Helicobacter pylori strain Hpfe082]
ATGCGTAAGGTTTTATGCACTCTTGTGGGCTTTTTGTTGGCTTTTAGCGCTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAGCCCCGGCGAATTTAAACCACCCCATGCAGGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTAGGTTTTGATGCGAAAATTTTAGAAAG
TAACGATCGCATTCTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAGCCGCAAAACAAAGAAAATACCCTTGAAAAGGCCCCCACAAACAACAAACCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAGAAGAGACTATAACCATTGGCGATAACACTAATGCAATGAAAATCGTTAAAAAAG
ACATTCAAAAAGGCTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCCAAA
CTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCTCTCTAA
ATTCCCGGTGATTTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTGGGCGATTATATTATCGCTG
AAGATGTCTCGGCTAAATGGACTTTAAGATTAGGCAAGGACTATTTGTGTATCCGTTTTATCAAAAAGGGTAAAGATGAA
TAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	92.331	100	0.941