Detailed information NTG0666789

Bioinformatically predicted

Overview

• Name: comB6
• Type: Machinery gene
• Locus tag: MPG69_RS00705
• Genome accession: NZ_CP094096
• Coordinates: 149494..150549 (+)
• Length: 351 a.a.
• NCBI ID: WP_245056708.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe082
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 144494..155549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG69_RS00675 (MPG69_00675)	-	144919..145332 (+)	414	WP_001023005.1	universal stress protein	-
MPG69_RS00680 (MPG69_00680)	-	145352..145627 (+)	276	WP_120929046.1	ATP-dependent Clp protease adaptor ClpS	-
MPG69_RS00685 (MPG69_00685)	-	145627..147849 (+)	2223	WP_245056012.1	ATP-dependent Clp protease ATP-binding subunit	-
MPG69_RS00690 (MPG69_00690)	panD	147839..148189 (+)	351	WP_000142212.1	aspartate 1-decarboxylase	-
MPG69_RS00695 (MPG69_00695)	-	148200..148493 (+)	294	WP_000347917.1	YbaB/EbfC family nucleoid-associated protein	-
MPG69_RS00700 (MPG69_00700)	-	148493..149488 (+)	996	WP_245056706.1	PDZ domain-containing protein	-
MPG69_RS00705 (MPG69_00705)	comB6	149494..150549 (+)	1056	WP_245056708.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG69_RS00710 (MPG69_00710)	comB7	150565..150690 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG69_RS00715 (MPG69_00715)	comB8	150687..151430 (+)	744	WP_000660533.1	virB8 family protein	Machinery gene
MPG69_RS00720 (MPG69_00720)	comB9	151430..152392 (+)	963	WP_180506423.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG69_RS00725 (MPG69_00725)	comB10	152385..153521 (+)	1137	WP_245056015.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG69_RS00730 (MPG69_00730)	-	153587..154999 (+)	1413	WP_245056017.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 39899.86 Da
• Isoelectric Point: 8.8165

>NTDB_id=666789 MPG69_RS00705 WP_245056708.1 149494..150549(+) (comB6) [Helicobacter pylori strain Hpfe082]
MKNDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSVVALAFMLFAYRSLKEQNFFSASALLEALLFVGFFALFNY
ALKNPMHFYEFFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLSHNEMSVWLFLSILQGLFLSVL
FAIIILVYLEVHVWCSLGVLFLAFGFFKTWRSVVVACLKKCFALGFYKPFLLFVGFLNVSVTKALIDAHMQEKQDLSLLL
VVALFLCCVFIIGVPFFINALFRVQNSLKETYKLATNLSANLSQNALNSLQYITTPPVSSSVSTSTRESATKEKETHSPT
FKVETTQLDVKIPNFKQKKVKKDTINTKNEI

Nucleotide

• Length: 1056 bp

>NTDB_id=666789 MPG69_RS00705 WP_245056708.1 149494..150549(+) (comB6) [Helicobacter pylori strain Hpfe082]
ATGAAAAATGACGCTTATGAAATTATTCTTTCTTGGTTTATCACGCCTCTCACGGCGATTTTAGGGCGTTTCGCTGAATT
TTTTCTCTACACTTTGCATGCGCAATTGGTGTTTAATAGCGTGGTCGCTTTGGCGTTCATGCTCTTTGCTTATAGGAGTT
TGAAAGAACAGAATTTCTTCAGCGCTAGCGCGCTTTTAGAAGCGTTATTGTTTGTGGGGTTTTTTGCACTTTTTAACTAC
GCTTTAAAAAATCCCATGCATTTTTATGAATTTTTCCAAAACGCTATTTTTATTGCACCTAACATGATCACACAAAGCCT
CTCTCAAAGCTTGAGCAACTTTTCTAACCACGCGCTTTCTTTAGATTTTATCTTTAATCATGGTTTTTATGCCCTTAGTT
TTATCAGCGATTTGAGCCATAATGAAATGTCTGTGTGGCTTTTTTTAAGCATTTTGCAAGGGCTTTTTTTGAGCGTGCTG
TTTGCGATTATTATTTTAGTGTATTTAGAAGTGCATGTGTGGTGCTCTTTAGGGGTGCTGTTTTTAGCGTTTGGGTTTTT
TAAAACCTGGAGGAGCGTTGTGGTGGCGTGCCTAAAAAAATGCTTCGCTCTTGGGTTTTACAAGCCTTTTTTGTTGTTTG
TGGGGTTTTTGAATGTGTCGGTTACTAAGGCTTTAATAGATGCGCATATGCAAGAAAAACAAGACTTAAGCCTTTTATTG
GTGGTAGCGTTATTTTTGTGTTGCGTTTTTATCATAGGCGTGCCTTTTTTCATCAACGCTTTGTTTAGGGTGCAAAACAG
CCTTAAAGAAACTTACAAACTCGCCACCAATTTGAGCGCTAACCTCAGCCAAAACGCCCTTAATTCCTTACAATATATCA
CGACCCCACCCGTTTCTTCTAGCGTTTCTACTTCTACAAGAGAAAGCGCCACTAAAGAAAAAGAAACGCATTCCCCCACA
TTCAAGGTAGAAACCACTCAATTAGATGTAAAAATCCCAAATTTCAAGCAAAAAAAGGTTAAAAAGGATACAATAAATAC
AAAAAATGAAATTTAA

Domains

Predicted by InterproScan.

• TrbL/VirB6 plasmid conjugal transfer protein (TrbL) (44-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB6	Helicobacter pylori 26695	96.581	100	0.966