Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OG806_RS39310 | Genome accession | NZ_CP108797 |
| Coordinates | 8622802..8625324 (-) | Length | 840 a.a. |
| NCBI ID | WP_406395702.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00882 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 8617802..8630324
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OG806_RS39295 (OG806_39220) | - | 8618386..8619951 (-) | 1566 | WP_328641762.1 | CocE/NonD family hydrolase | - |
| OG806_RS39300 (OG806_39225) | - | 8620068..8620829 (-) | 762 | WP_328641763.1 | hypothetical protein | - |
| OG806_RS39305 (OG806_39230) | ggt | 8620974..8622770 (+) | 1797 | WP_406395700.1 | gamma-glutamyltransferase | - |
| OG806_RS39310 (OG806_39235) | clpC | 8622802..8625324 (-) | 2523 | WP_406395702.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OG806_RS39315 (OG806_39240) | map | 8625652..8626419 (-) | 768 | WP_406161558.1 | type I methionyl aminopeptidase | - |
| OG806_RS39320 (OG806_39245) | - | 8626452..8626703 (+) | 252 | WP_020119078.1 | helix-turn-helix domain-containing protein | - |
| OG806_RS39325 (OG806_39250) | - | 8626839..8629103 (+) | 2265 | WP_406395705.1 | hypothetical protein | - |
| OG806_RS39330 (OG806_39255) | - | 8629283..8630125 (+) | 843 | WP_326662412.1 | nitrilase-related carbon-nitrogen hydrolase | - |
Sequence
Protein
Download Length: 840 a.a. Molecular weight: 91688.62 Da Isoelectric Point: 4.9427
>NTDB_id=666767 OG806_RS39310 WP_406395702.1 8622802..8625324(-) (clpC) [Streptomyces sp. NBC_00882]
MTSGFSGPEGYDAFGEFLARFFGGPRPGPRQINIGQLLSQPARELVRGAAQYAAEHGSRDLDTQHLLRAALAAEPTRTLL
SRAGADPDSLASEIDERSGPVQHQPEEAPPPTSLSLTPAAKRALLDAHDLARARGAGYIGPEHVLSALAANPDSAAGHIL
NSARFASTGLPPETAPDSGQPRGEAPRNTGTPTLDKYGRDLTDLARQGRIDPVIGRDEEIEQTIEVLSRRGKNNPVLIGD
AGVGKTAIVEGLAQRIVDGDVPDVLTGRRVFALDLTGVVAGTRYRGDFEERLTNIVGEIGDNSDRLIVFIDELHTVVGAG
GGGEGGSLDAGNILKPALARGELHIVGATTLEEFRRIEKDAALARRFQPILVPEPTAADAIEILRGLRDRYEAHHQVRYS
DEALVAAVELSDRYLPDRRLPDKAIDLIDQAGARVRLRARTKGTDVRALEREVEQLTRDKDQAVADEQYEQATQLRDRIA
ELKQRIGEATGNEEADEGQNLEVTAEAIAQVVSRLTGIPVSSLTEEEKDRLLGLERHLHERVVGQDEAVRVVSDAVLRSR
AGLASPDRPIGSFLFLGPTGVGKTELARALAESLFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRR
HPYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGAGIGFGPGGADSDEEARRE
RILRPLREHFRPEFLNRIDEIVVFRQLTSDQLREITRLLLERTRRLLHAQGVSVDFTDSAVDWLAERGYQPEYGARPLRR
TIQREVDNQLSRLLLDGRIADGGRVTVDTEAGGLTFTETP
MTSGFSGPEGYDAFGEFLARFFGGPRPGPRQINIGQLLSQPARELVRGAAQYAAEHGSRDLDTQHLLRAALAAEPTRTLL
SRAGADPDSLASEIDERSGPVQHQPEEAPPPTSLSLTPAAKRALLDAHDLARARGAGYIGPEHVLSALAANPDSAAGHIL
NSARFASTGLPPETAPDSGQPRGEAPRNTGTPTLDKYGRDLTDLARQGRIDPVIGRDEEIEQTIEVLSRRGKNNPVLIGD
AGVGKTAIVEGLAQRIVDGDVPDVLTGRRVFALDLTGVVAGTRYRGDFEERLTNIVGEIGDNSDRLIVFIDELHTVVGAG
GGGEGGSLDAGNILKPALARGELHIVGATTLEEFRRIEKDAALARRFQPILVPEPTAADAIEILRGLRDRYEAHHQVRYS
DEALVAAVELSDRYLPDRRLPDKAIDLIDQAGARVRLRARTKGTDVRALEREVEQLTRDKDQAVADEQYEQATQLRDRIA
ELKQRIGEATGNEEADEGQNLEVTAEAIAQVVSRLTGIPVSSLTEEEKDRLLGLERHLHERVVGQDEAVRVVSDAVLRSR
AGLASPDRPIGSFLFLGPTGVGKTELARALAESLFGSEERMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRR
HPYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGAGIGFGPGGADSDEEARRE
RILRPLREHFRPEFLNRIDEIVVFRQLTSDQLREITRLLLERTRRLLHAQGVSVDFTDSAVDWLAERGYQPEYGARPLRR
TIQREVDNQLSRLLLDGRIADGGRVTVDTEAGGLTFTETP
Nucleotide
Download Length: 2523 bp
>NTDB_id=666767 OG806_RS39310 WP_406395702.1 8622802..8625324(-) (clpC) [Streptomyces sp. NBC_00882]
ATGACCAGCGGATTCAGCGGACCGGAAGGCTATGACGCCTTCGGAGAGTTTCTCGCCCGTTTCTTCGGCGGACCGCGTCC
CGGCCCCCGGCAGATCAACATCGGCCAGCTGCTGAGCCAGCCGGCCCGGGAGCTGGTGCGGGGCGCCGCCCAGTACGCCG
CCGAGCACGGCAGCCGGGATCTGGACACCCAGCACCTGCTGCGCGCCGCGCTGGCCGCCGAGCCGACCCGGACCCTGCTG
AGCCGGGCCGGCGCCGATCCCGACTCCCTCGCCTCGGAGATCGACGAGCGTTCCGGCCCCGTCCAGCACCAGCCCGAAGA
GGCCCCTCCACCCACCTCGCTGTCCCTCACCCCGGCCGCCAAGCGGGCCCTGCTGGACGCACACGACCTGGCCCGGGCCC
GGGGCGCCGGTTACATCGGCCCGGAGCACGTCCTGAGCGCCCTGGCCGCGAATCCCGATTCGGCCGCCGGGCACATCCTG
AACTCGGCCCGGTTCGCCTCCACCGGTCTGCCTCCCGAGACGGCCCCGGATTCCGGACAACCCCGCGGCGAGGCACCGCG
CAACACGGGCACGCCCACGCTCGACAAGTACGGCCGCGATCTCACCGACCTGGCACGCCAGGGCCGTATCGACCCGGTGA
TCGGCCGGGACGAGGAGATCGAGCAGACCATCGAGGTGCTGTCCCGGCGCGGCAAGAACAACCCGGTGCTCATCGGTGAC
GCGGGCGTCGGCAAGACCGCCATCGTGGAGGGCCTGGCCCAGCGGATCGTCGACGGGGACGTGCCCGACGTGCTGACCGG
GCGTCGGGTCTTCGCCCTCGACCTGACCGGGGTGGTGGCCGGCACCCGCTACCGGGGCGACTTCGAGGAGCGCCTGACGA
ACATCGTGGGCGAGATCGGCGACAACTCCGACCGGCTGATCGTCTTCATCGACGAGCTGCACACGGTCGTCGGCGCGGGC
GGGGGCGGCGAGGGCGGCTCGCTGGACGCCGGGAACATCCTCAAGCCCGCCCTGGCCCGCGGCGAGCTGCACATCGTGGG
CGCGACCACGCTGGAGGAGTTCCGCAGGATCGAGAAGGACGCGGCCCTGGCCCGCCGCTTCCAGCCGATCCTGGTACCGG
AGCCCACCGCGGCGGACGCGATCGAGATCCTGCGCGGGCTGCGCGACCGCTACGAGGCCCACCACCAGGTCCGCTACAGC
GACGAGGCGCTGGTGGCCGCCGTGGAGCTGTCCGACCGCTATCTCCCCGACCGCCGCCTGCCGGACAAGGCGATCGACCT
CATCGACCAGGCGGGGGCGCGGGTACGCCTTCGCGCGCGGACCAAGGGCACCGACGTACGGGCCCTGGAGCGCGAGGTCG
AGCAGCTGACCCGGGACAAGGACCAGGCGGTCGCCGACGAGCAGTACGAGCAGGCCACACAACTGCGCGACCGCATCGCG
GAGTTGAAGCAGCGGATCGGCGAGGCCACCGGGAACGAAGAGGCCGACGAGGGCCAGAACCTGGAGGTCACCGCGGAGGC
CATCGCCCAGGTGGTGTCCCGGCTGACGGGCATCCCGGTCAGCAGCCTCACCGAGGAGGAGAAGGACCGGCTGCTCGGCC
TGGAACGGCACCTGCACGAGCGGGTGGTCGGCCAGGACGAGGCCGTACGGGTCGTCTCGGACGCCGTGCTGCGCTCCCGC
GCGGGCCTCGCGAGCCCGGACCGCCCGATCGGCAGCTTCCTCTTCCTCGGCCCGACGGGCGTCGGCAAGACCGAACTGGC
CCGCGCCCTCGCCGAGTCCCTGTTCGGCAGCGAGGAGCGCATGGTCCGGCTGGACATGAGCGAGTACCAGGAGCGGCACA
CGGTCAGCCGGCTGGTCGGCGCCCCGCCCGGATACGTCGGCCACGAGGAGGCGGGCCAGCTCACCGAGGTGGTCCGCAGG
CACCCCTATTCGCTGCTGCTCCTGGACGAGGTGGAGAAGGCCCACCCGGACGTGTTCAACATCCTCCTCCAGGTCCTCGA
CGACGGACGGCTCACCGACTCCCAGGGCCGCACGGTCGACTTCACCAACACCGTCATCGTGATGACGAGCAACCTGGGCT
CGGAGGCGATCACCCGCAGGGGCGCGGGCATCGGCTTCGGGCCCGGCGGAGCGGACTCGGACGAGGAGGCCCGCCGAGAG
CGGATCCTGCGCCCCCTGCGCGAGCACTTCCGCCCCGAGTTCCTGAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCT
GACAAGTGATCAACTACGCGAGATCACCAGGCTGTTGCTGGAGCGGACCCGCCGCCTGCTCCACGCCCAGGGCGTCTCGG
TCGACTTCACCGACAGTGCGGTGGACTGGCTCGCCGAACGCGGCTACCAGCCGGAGTACGGCGCCCGGCCGCTGCGCCGC
ACGATCCAGCGGGAGGTGGACAACCAGCTGTCCCGCCTGCTCCTGGACGGCAGGATCGCGGACGGCGGCCGGGTGACGGT
GGACACGGAGGCAGGCGGGTTGACGTTCACCGAGACTCCGTAG
ATGACCAGCGGATTCAGCGGACCGGAAGGCTATGACGCCTTCGGAGAGTTTCTCGCCCGTTTCTTCGGCGGACCGCGTCC
CGGCCCCCGGCAGATCAACATCGGCCAGCTGCTGAGCCAGCCGGCCCGGGAGCTGGTGCGGGGCGCCGCCCAGTACGCCG
CCGAGCACGGCAGCCGGGATCTGGACACCCAGCACCTGCTGCGCGCCGCGCTGGCCGCCGAGCCGACCCGGACCCTGCTG
AGCCGGGCCGGCGCCGATCCCGACTCCCTCGCCTCGGAGATCGACGAGCGTTCCGGCCCCGTCCAGCACCAGCCCGAAGA
GGCCCCTCCACCCACCTCGCTGTCCCTCACCCCGGCCGCCAAGCGGGCCCTGCTGGACGCACACGACCTGGCCCGGGCCC
GGGGCGCCGGTTACATCGGCCCGGAGCACGTCCTGAGCGCCCTGGCCGCGAATCCCGATTCGGCCGCCGGGCACATCCTG
AACTCGGCCCGGTTCGCCTCCACCGGTCTGCCTCCCGAGACGGCCCCGGATTCCGGACAACCCCGCGGCGAGGCACCGCG
CAACACGGGCACGCCCACGCTCGACAAGTACGGCCGCGATCTCACCGACCTGGCACGCCAGGGCCGTATCGACCCGGTGA
TCGGCCGGGACGAGGAGATCGAGCAGACCATCGAGGTGCTGTCCCGGCGCGGCAAGAACAACCCGGTGCTCATCGGTGAC
GCGGGCGTCGGCAAGACCGCCATCGTGGAGGGCCTGGCCCAGCGGATCGTCGACGGGGACGTGCCCGACGTGCTGACCGG
GCGTCGGGTCTTCGCCCTCGACCTGACCGGGGTGGTGGCCGGCACCCGCTACCGGGGCGACTTCGAGGAGCGCCTGACGA
ACATCGTGGGCGAGATCGGCGACAACTCCGACCGGCTGATCGTCTTCATCGACGAGCTGCACACGGTCGTCGGCGCGGGC
GGGGGCGGCGAGGGCGGCTCGCTGGACGCCGGGAACATCCTCAAGCCCGCCCTGGCCCGCGGCGAGCTGCACATCGTGGG
CGCGACCACGCTGGAGGAGTTCCGCAGGATCGAGAAGGACGCGGCCCTGGCCCGCCGCTTCCAGCCGATCCTGGTACCGG
AGCCCACCGCGGCGGACGCGATCGAGATCCTGCGCGGGCTGCGCGACCGCTACGAGGCCCACCACCAGGTCCGCTACAGC
GACGAGGCGCTGGTGGCCGCCGTGGAGCTGTCCGACCGCTATCTCCCCGACCGCCGCCTGCCGGACAAGGCGATCGACCT
CATCGACCAGGCGGGGGCGCGGGTACGCCTTCGCGCGCGGACCAAGGGCACCGACGTACGGGCCCTGGAGCGCGAGGTCG
AGCAGCTGACCCGGGACAAGGACCAGGCGGTCGCCGACGAGCAGTACGAGCAGGCCACACAACTGCGCGACCGCATCGCG
GAGTTGAAGCAGCGGATCGGCGAGGCCACCGGGAACGAAGAGGCCGACGAGGGCCAGAACCTGGAGGTCACCGCGGAGGC
CATCGCCCAGGTGGTGTCCCGGCTGACGGGCATCCCGGTCAGCAGCCTCACCGAGGAGGAGAAGGACCGGCTGCTCGGCC
TGGAACGGCACCTGCACGAGCGGGTGGTCGGCCAGGACGAGGCCGTACGGGTCGTCTCGGACGCCGTGCTGCGCTCCCGC
GCGGGCCTCGCGAGCCCGGACCGCCCGATCGGCAGCTTCCTCTTCCTCGGCCCGACGGGCGTCGGCAAGACCGAACTGGC
CCGCGCCCTCGCCGAGTCCCTGTTCGGCAGCGAGGAGCGCATGGTCCGGCTGGACATGAGCGAGTACCAGGAGCGGCACA
CGGTCAGCCGGCTGGTCGGCGCCCCGCCCGGATACGTCGGCCACGAGGAGGCGGGCCAGCTCACCGAGGTGGTCCGCAGG
CACCCCTATTCGCTGCTGCTCCTGGACGAGGTGGAGAAGGCCCACCCGGACGTGTTCAACATCCTCCTCCAGGTCCTCGA
CGACGGACGGCTCACCGACTCCCAGGGCCGCACGGTCGACTTCACCAACACCGTCATCGTGATGACGAGCAACCTGGGCT
CGGAGGCGATCACCCGCAGGGGCGCGGGCATCGGCTTCGGGCCCGGCGGAGCGGACTCGGACGAGGAGGCCCGCCGAGAG
CGGATCCTGCGCCCCCTGCGCGAGCACTTCCGCCCCGAGTTCCTGAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCT
GACAAGTGATCAACTACGCGAGATCACCAGGCTGTTGCTGGAGCGGACCCGCCGCCTGCTCCACGCCCAGGGCGTCTCGG
TCGACTTCACCGACAGTGCGGTGGACTGGCTCGCCGAACGCGGCTACCAGCCGGAGTACGGCGCCCGGCCGCTGCGCCGC
ACGATCCAGCGGGAGGTGGACAACCAGCTGTCCCGCCTGCTCCTGGACGGCAGGATCGCGGACGGCGGCCGGGTGACGGT
GGACACGGAGGCAGGCGGGTTGACGTTCACCGAGACTCCGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
48.712 |
97.024 |
0.473 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.509 |
99.405 |
0.452 |
| clpC | Streptococcus pneumoniae Rx1 |
45.509 |
99.405 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.509 |
99.405 |
0.452 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.953 |
95.595 |
0.439 |
| clpC | Streptococcus mutans UA159 |
43.713 |
99.405 |
0.435 |
| clpC | Streptococcus thermophilus LMD-9 |
46.419 |
89.762 |
0.417 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.154 |
89.762 |
0.414 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.075 |
79.167 |
0.396 |
| clpE | Streptococcus mutans UA159 |
52.809 |
74.167 |
0.392 |
| clpE | Streptococcus pneumoniae Rx1 |
50.641 |
74.286 |
0.376 |
| clpE | Streptococcus pneumoniae D39 |
50.641 |
74.286 |
0.376 |
| clpE | Streptococcus pneumoniae R6 |
50.641 |
74.286 |
0.376 |
| clpE | Streptococcus pneumoniae TIGR4 |
50.321 |
74.286 |
0.374 |