Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG47_RS00270 | Genome accession | NZ_CP094095 |
| Coordinates | 62942..63517 (+) | Length | 191 a.a. |
| NCBI ID | WP_245016194.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe083 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57942..68517
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG47_RS00245 (MPG47_00245) | uvrD | 58633..60678 (+) | 2046 | WP_245016190.1 | DNA helicase UvrD | - |
| MPG47_RS00250 (MPG47_00250) | flgA | 60675..61331 (+) | 657 | WP_245016191.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG47_RS00255 (MPG47_00255) | - | 61341..61904 (+) | 564 | WP_000780121.1 | UbiX family flavin prenyltransferase | - |
| MPG47_RS00260 (MPG47_00260) | coaD | 61904..62377 (+) | 474 | WP_245016192.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG47_RS00265 (MPG47_00265) | tmk | 62379..62954 (+) | 576 | WP_245016193.1 | dTMP kinase | - |
| MPG47_RS00270 (MPG47_00270) | comFC | 62942..63517 (+) | 576 | WP_245016194.1 | ComF family protein | Machinery gene |
| MPG47_RS00275 (MPG47_00275) | - | 63550..65589 (+) | 2040 | WP_245016195.1 | N-6 DNA methylase | - |
| MPG47_RS00280 (MPG47_00280) | - | 65586..66827 (+) | 1242 | WP_245016196.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21351.94 Da Isoelectric Point: 9.0978
>NTDB_id=666767 MPG47_RS00270 WP_245016194.1 62942..63517(+) (comFC) [Helicobacter pylori strain Hpfe083]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666767 MPG47_RS00270 WP_245016194.1 62942..63517(+) (comFC) [Helicobacter pylori strain Hpfe083]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAACCCCTTTGCCCAAATTGCCTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGCGCTAACAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAACCCCTTTGCCCAAATTGCCTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGCGCTAACAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |