Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPF97_RS00270 | Genome accession | NZ_CP094093 |
| Coordinates | 60413..60988 (+) | Length | 191 a.a. |
| NCBI ID | WP_245102537.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe085 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55413..65988
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPF97_RS00245 (MPF97_00245) | uvrD | 56104..58149 (+) | 2046 | WP_245102531.1 | DNA helicase UvrD | - |
| MPF97_RS00250 (MPF97_00250) | flgA | 58146..58802 (+) | 657 | WP_245102533.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPF97_RS00255 (MPF97_00255) | - | 58812..59375 (+) | 564 | WP_154423516.1 | UbiX family flavin prenyltransferase | - |
| MPF97_RS00260 (MPF97_00260) | coaD | 59375..59848 (+) | 474 | WP_180481583.1 | pantetheine-phosphate adenylyltransferase | - |
| MPF97_RS00265 (MPF97_00265) | tmk | 59850..60425 (+) | 576 | WP_245102535.1 | dTMP kinase | - |
| MPF97_RS00270 (MPF97_00270) | comFC | 60413..60988 (+) | 576 | WP_245102537.1 | ComF family protein | Machinery gene |
| MPF97_RS00275 (MPF97_00275) | - | 61021..63060 (+) | 2040 | WP_245102539.1 | N-6 DNA methylase | - |
| MPF97_RS00280 (MPF97_00280) | - | 63057..63737 (+) | 681 | WP_245102540.1 | restriction endonuclease subunit S | - |
| MPF97_RS00285 (MPF97_00285) | - | 63764..64321 (+) | 558 | WP_245102542.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21368.93 Da Isoelectric Point: 8.8888
>NTDB_id=666727 MPF97_RS00270 WP_245102537.1 60413..60988(+) (comFC) [Helicobacter pylori strain Hpfe085]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDESLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRDFTFKGDESLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666727 MPF97_RS00270 WP_245102537.1 60413..60988(+) (comFC) [Helicobacter pylori strain Hpfe085]
ATGCGTTGTTTGACTTGCTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTACAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTATGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAGGGCGATGAAAGTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGCTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
GGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTACAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTATGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAGGGCGATGAAAGTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |