Detailed information NTG0666707

Bioinformatically predicted

Overview

• Name: comB6
• Type: Machinery gene
• Locus tag: MPG82_RS00720
• Genome accession: NZ_CP094092
• Coordinates: 151074..152129 (+)
• Length: 351 a.a.
• NCBI ID: WP_245083602.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe086
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 146074..157129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG82_RS00690 (MPG82_00690)	-	146503..146916 (+)	414	WP_001023008.1	universal stress protein	-
MPG82_RS00695 (MPG82_00695)	-	146930..147205 (+)	276	WP_000784915.1	ATP-dependent Clp protease adaptor ClpS	-
MPG82_RS00700 (MPG82_00700)	-	147205..149427 (+)	2223	WP_245082760.1	ATP-dependent Clp protease ATP-binding subunit	-
MPG82_RS00705 (MPG82_00705)	panD	149417..149767 (+)	351	WP_245082763.1	aspartate 1-decarboxylase	-
MPG82_RS00710 (MPG82_00710)	-	149778..150071 (+)	294	WP_000347917.1	YbaB/EbfC family nucleoid-associated protein	-
MPG82_RS00715 (MPG82_00715)	-	150071..151066 (+)	996	WP_245083601.1	PDZ domain-containing protein	-
MPG82_RS00720 (MPG82_00720)	comB6	151074..152129 (+)	1056	WP_245083602.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG82_RS00725 (MPG82_00725)	comB7	152145..152258 (+)	114	WP_001218100.1	hypothetical protein	Machinery gene
MPG82_RS00730 (MPG82_00730)	comB8	152255..152998 (+)	744	WP_000660524.1	virB8 family protein	Machinery gene
MPG82_RS00735 (MPG82_00735)	comB9	152998..153960 (+)	963	WP_245082766.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG82_RS00740 (MPG82_00740)	comB10	153953..155089 (+)	1137	WP_245082769.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG82_RS00745 (MPG82_00745)	-	155159..156571 (+)	1413	WP_245082773.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 39756.69 Da
• Isoelectric Point: 8.5786

>NTDB_id=666707 MPG82_RS00720 WP_245083602.1 151074..152129(+) (comB6) [Helicobacter pylori strain Hpfe086]
MKNDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSVVALAFMLFAYRSLKEQNFFSASALTEALLFVGFFALFNY
ALKNPMHFYEFFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLNHNEMSVWLFLSILQGLFLSVL
FAIIILVYLEVHVWCSLGVLFLAFGFFKTWRSVVVACLKKCFALGFYKPFLLLVGFLNVSVTKALIDAHMQEKQDLSLLL
VVALFLCCVFIIGVPFFINALFRVQNSLKETYKLATSLSANLSQNALNSLQYITTPPASSSVSASMSESATKEKETHSPT
FKVETTQLDVKIPNFKQKKVKKDTINTKNEI

Nucleotide

• Length: 1056 bp

>NTDB_id=666707 MPG82_RS00720 WP_245083602.1 151074..152129(+) (comB6) [Helicobacter pylori strain Hpfe086]
ATGAAAAATGACGCTTATGAGATTATCCTTTCTTGGTTTATCACGCCTTTAACGGCGATTTTAGGGCGTTTCGCTGAATT
TTTTCTCTACACTTTGCATGCGCAATTGGTGTTTAATAGCGTGGTCGCTTTGGCGTTCATGCTCTTTGCTTATAGGAGTT
TGAAAGAACAGAATTTCTTCAGCGCTAGCGCACTAACAGAAGCGTTATTGTTTGTGGGGTTTTTTGCGCTTTTTAACTAC
GCTTTAAAAAATCCCATGCATTTTTATGAATTTTTCCAAAACGCTATTTTTATTGCACCTAACATGATCACACAAAGCCT
CTCTCAAAGCTTGAGCAACTTTTCTAATCATGCACTTTCTTTAGATTTTATCTTTAATCATGGTTTTTATGCCCTTAGTT
TTATCAGCGATTTGAATCATAATGAAATGTCTGTGTGGCTTTTTTTAAGCATTTTGCAAGGGCTTTTTTTGAGCGTGCTG
TTTGCGATCATTATTTTAGTGTATTTAGAAGTGCATGTGTGGTGCTCTTTAGGGGTGCTGTTTTTAGCGTTTGGGTTTTT
TAAAACCTGGAGGAGCGTTGTGGTGGCGTGCCTAAAAAAATGCTTCGCTCTTGGGTTTTACAAGCCTTTTTTGTTGTTGG
TGGGGTTTTTGAATGTGTCGGTTACTAAGGCTTTAATAGACGCTCATATGCAAGAGAAACAAGACTTAAGCCTTTTATTG
GTGGTAGCGTTATTTTTGTGTTGCGTTTTTATCATAGGCGTGCCTTTTTTCATCAACGCTTTGTTTAGGGTGCAAAACAG
CCTTAAAGAAACTTACAAACTCGCTACCAGTTTGAGCGCTAACCTCAGCCAAAACGCCCTTAATTCCTTACAATATATCA
CGACCCCACCCGCTTCTTCTAGCGTTTCTGCTTCTATGAGCGAAAGTGCCACTAAAGAAAAAGAAACGCATTCCCCCACA
TTCAAGGTAGAAACCACTCAATTAGATGTAAAAATCCCAAATTTCAAGCAAAAAAAGGTTAAAAAGGATACAATAAATAC
AAAAAATGAAATTTAA

Domains

Predicted by InterproScan.

• TrbL/VirB6 plasmid conjugal transfer protein (TrbL) (44-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB6	Helicobacter pylori 26695	97.436	100	0.974