Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG82_RS00285 | Genome accession | NZ_CP094092 |
| Coordinates | 63846..64421 (+) | Length | 191 a.a. |
| NCBI ID | WP_245082609.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe086 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58846..69421
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG82_RS00260 (MPG82_00260) | uvrD | 59537..61582 (+) | 2046 | WP_245082597.1 | DNA helicase UvrD | - |
| MPG82_RS00265 (MPG82_00265) | flgA | 61579..62235 (+) | 657 | WP_245082599.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG82_RS00270 (MPG82_00270) | - | 62245..62808 (+) | 564 | WP_245082601.1 | UbiX family flavin prenyltransferase | - |
| MPG82_RS00275 (MPG82_00275) | coaD | 62808..63281 (+) | 474 | WP_245082604.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG82_RS00280 (MPG82_00280) | tmk | 63283..63858 (+) | 576 | WP_245082606.1 | dTMP kinase | - |
| MPG82_RS00285 (MPG82_00285) | comFC | 63846..64421 (+) | 576 | WP_245082609.1 | ComF family protein | Machinery gene |
| MPG82_RS00290 (MPG82_00290) | - | 64454..66490 (+) | 2037 | WP_245082613.1 | N-6 DNA methylase | - |
| MPG82_RS00295 (MPG82_00295) | - | 66487..67723 (+) | 1237 | Protein_57 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21394.07 Da Isoelectric Point: 9.2796
>NTDB_id=666706 MPG82_RS00285 WP_245082609.1 63846..64421(+) (comFC) [Helicobacter pylori strain Hpfe086]
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKVHFAIALCSADE
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666706 MPG82_RS00285 WP_245082609.1 63846..64421(+) (comFC) [Helicobacter pylori strain Hpfe086]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGTTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCTTAAATATCAAAGTCCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGTTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCTTAAATATCAAAGTCCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
38.144 |
100 |
0.387 |