Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPF86_RS00290 | Genome accession | NZ_CP094091 |
| Coordinates | 64016..64591 (+) | Length | 191 a.a. |
| NCBI ID | WP_245064469.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe088 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59016..69591
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPF86_RS00265 (MPF86_00265) | uvrD | 59707..61752 (+) | 2046 | WP_245064465.1 | DNA helicase UvrD | - |
| MPF86_RS00270 (MPF86_00270) | flgA | 61749..62405 (+) | 657 | WP_154414435.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPF86_RS00275 (MPF86_00275) | - | 62415..62978 (+) | 564 | WP_245064467.1 | UbiX family flavin prenyltransferase | - |
| MPF86_RS00280 (MPF86_00280) | coaD | 62978..63451 (+) | 474 | WP_245065338.1 | pantetheine-phosphate adenylyltransferase | - |
| MPF86_RS00285 (MPF86_00285) | tmk | 63453..64028 (+) | 576 | WP_180456200.1 | dTMP kinase | - |
| MPF86_RS00290 (MPF86_00290) | comFC | 64016..64591 (+) | 576 | WP_245064469.1 | ComF family protein | Machinery gene |
| MPF86_RS00295 (MPF86_00295) | - | 64624..66663 (+) | 2040 | WP_245064471.1 | N-6 DNA methylase | - |
| MPF86_RS00300 (MPF86_00300) | - | 66660..67835 (+) | 1176 | WP_245064473.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21335.90 Da Isoelectric Point: 8.8888
>NTDB_id=666686 MPF86_RS00290 WP_245064469.1 64016..64591(+) (comFC) [Helicobacter pylori strain Hpfe088]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAANTISYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666686 MPF86_RS00290 WP_245064469.1 64016..64591(+) (comFC) [Helicobacter pylori strain Hpfe088]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAATGATTTGCCCTTAAGCCTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCAGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGTGCCAACAATCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCATTTTGCGATCGCACTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAATGATTTGCCCTTAAGCCTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCAGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTGCTAATACTATTTCGTATGCTGGGAAAAGCCTGG
AATTTCGTGCCAACAATCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCATTTTGCGATCGCACTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |